Finished a new release: libDAI 0.2.7.
[libdai.git] / Makefile
1 # This file is part of libDAI - http://www.libdai.org/
2 #
3 # libDAI is licensed under the terms of the GNU General Public License version
4 # 2, or (at your option) any later version. libDAI is distributed without any
5 # warranty. See the file COPYING for more details.
6 #
7 # Copyright (C) 2006-2010 Joris Mooij [joris dot mooij at libdai dot org]
8 # Copyright (C) 2006-2007 Radboud University Nijmegen, The Netherlands
9
10
11 # Load the platform independent build configuration file
12 include Makefile.ALL
13
14 # Load the local configuration from Makefile.conf
15 include Makefile.conf
16
17 # Set version and date
18 DAI_VERSION="0.2.7"
19 DAI_DATE="August 19, 2010"
20
21 # Directories of libDAI sources
22 # Location of libDAI headers
23 INC=include/dai
24 # Location of libDAI source files
25 SRC=src
26 # Destination directory of libDAI library
27 LIB=lib
28
29 # Set final compiler flags
30 ifdef DEBUG
31 CCFLAGS:=$(CCFLAGS) $(CCDEBUGFLAGS)
32 else
33 CCFLAGS:=$(CCFLAGS) $(CCNODEBUGFLAGS)
34 endif
35
36 # Define build targets
37 TARGETS:=lib tests utils examples
38 ifdef WITH_MATLAB
39 TARGETS:=$(TARGETS) matlabs
40 endif
41 TARGETS:=$(TARGETS) unittests testregression testem
42 ifdef WITH_DOC
43 TARGETS:=$(TARGETS) doc
44 endif
45
46 # Define conditional build targets
47 NAMES:=graph dag bipgraph varset daialg alldai clustergraph factor factorgraph properties regiongraph util weightedgraph exceptions exactinf evidence emalg io
48 ifdef WITH_BP
49 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_BP
50 NAMES:=$(NAMES) bp
51 endif
52 ifdef WITH_FBP
53 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_FBP
54 NAMES:=$(NAMES) fbp
55 endif
56 ifdef WITH_TRWBP
57 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_TRWBP
58 NAMES:=$(NAMES) trwbp
59 endif
60 ifdef WITH_MF
61 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_MF
62 NAMES:=$(NAMES) mf
63 endif
64 ifdef WITH_HAK
65 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_HAK
66 NAMES:=$(NAMES) hak
67 endif
68 ifdef WITH_LC
69 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_LC
70 NAMES:=$(NAMES) lc
71 endif
72 ifdef WITH_TREEEP
73 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_TREEEP
74 NAMES:=$(NAMES) treeep
75 endif
76 ifdef WITH_JTREE
77 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_JTREE
78 NAMES:=$(NAMES) jtree
79 endif
80 ifdef WITH_MR
81 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_MR
82 NAMES:=$(NAMES) mr
83 endif
84 ifdef WITH_GIBBS
85 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_GIBBS
86 NAMES:=$(NAMES) gibbs
87 endif
88 ifdef WITH_CBP
89 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_CBP
90 NAMES:=$(NAMES) bbp cbp bp_dual
91 endif
92 ifdef WITH_DECMAP
93 WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_DECMAP
94 NAMES:=$(NAMES) decmap
95 endif
96
97 # Define standard libDAI header dependencies, source file names and object file names
98 HEADERS=$(foreach name,graph dag bipgraph index var factor varset smallset prob daialg properties alldai enum exceptions util,$(INC)/$(name).h)
99 SOURCES:=$(foreach name,$(NAMES),$(SRC)/$(name).cpp)
100 OBJECTS:=$(foreach name,$(NAMES),$(name)$(OE))
101
102 # Setup final command for C++ compiler
103 ifneq ($(OS),WINDOWS)
104 CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS) $(CCLIB)
105 else
106 CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS)
107 LIBS:=$(LIBS) $(CCLIB)
108 endif
109
110 # Setup final command for MEX
111 ifdef NEW_MATLAB
112 MEXFLAGS:=$(MEXFLAGS) -largeArrayDims
113 else
114 MEXFLAGS:=$(MEXFLAGS) -DSMALLMEM
115 endif
116 MEX:=$(MEX) $(MEXINC) $(MEXFLAGS) $(WITHFLAGS) $(MEXLIB)
117
118
119 # META TARGETS
120 ###############
121
122 all : $(TARGETS)
123 @echo
124 @echo libDAI built successfully!
125
126 EXAMPLES=$(foreach name,example example_bipgraph example_varset example_permute example_sprinkler example_sprinkler_em,examples/$(name)$(EE))
127 ifdef WITH_GIBBS
128 EXAMPLES:=$(EXAMPLES) examples/example_sprinkler_gibbs$(EE)
129 endif
130 ifdef WITH_CIMG
131 EXAMPLES:=$(EXAMPLES) examples/example_imagesegmentation$(EE)
132 endif
133 examples : $(EXAMPLES)
134
135 matlabs : matlab/dai$(ME) matlab/dai_readfg$(ME) matlab/dai_writefg$(ME) matlab/dai_potstrength$(ME)
136
137 unittests : tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/dag_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
138 @echo 'Running unit tests...(note: output containing "EXCEPTION" does not indicate an error)'
139 @echo
140 tests/unit/var_test$(EE)
141 tests/unit/smallset_test$(EE)
142 tests/unit/varset_test$(EE)
143 tests/unit/graph_test$(EE)
144 tests/unit/dag_test$(EE)
145 tests/unit/bipgraph_test$(EE)
146 tests/unit/weightedgraph_test$(EE)
147 tests/unit/enum_test$(EE)
148 tests/unit/util_test$(EE)
149 tests/unit/exceptions_test$(EE)
150 tests/unit/properties_test$(EE)
151 tests/unit/index_test$(EE)
152 tests/unit/prob_test$(EE)
153 tests/unit/factor_test$(EE)
154 tests/unit/factorgraph_test$(EE)
155 tests/unit/clustergraph_test$(EE)
156 tests/unit/regiongraph_test$(EE)
157 tests/unit/daialg_test$(EE)
158 tests/unit/alldai_test$(EE)
159 @echo
160 @echo 'All unit tests completed successfully!'
161 @echo
162
163 tests : tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE) $(unittests)
164
165 utils : utils/createfg$(EE) utils/fg2dot$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
166
167 lib: $(LIB)/libdai$(LE)
168
169
170 # OBJECTS
171 ##########
172
173 %$(OE) : $(SRC)/%.cpp $(INC)/%.h $(HEADERS)
174 $(CC) -c $<
175
176 bbp$(OE) : $(SRC)/bbp.cpp $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
177 $(CC) -c $<
178
179 cbp$(OE) : $(SRC)/cbp.cpp $(INC)/cbp.h $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
180 $(CC) -c $<
181
182 hak$(OE) : $(SRC)/hak.cpp $(INC)/hak.h $(HEADERS) $(INC)/regiongraph.h
183 $(CC) -c $<
184
185 jtree$(OE) : $(SRC)/jtree.cpp $(INC)/jtree.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h
186 $(CC) -c $<
187
188 treeep$(OE) : $(SRC)/treeep.cpp $(INC)/treeep.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h $(INC)/jtree.h
189 $(CC) -c $<
190
191 emalg$(OE) : $(SRC)/emalg.cpp $(INC)/emalg.h $(INC)/evidence.h $(HEADERS)
192 $(CC) -c $<
193
194 decmap$(OE) : $(SRC)/decmap.cpp $(INC)/decmap.h $(HEADERS)
195 $(CC) -c $<
196
197
198 # EXAMPLES
199 ###########
200
201 examples/%$(EE) : examples/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
202 $(CC) $(CCO)$@ $< $(LIBS)
203
204 examples/example_sprinkler_gibbs$(EE) : examples/example_sprinkler_gibbs.cpp $(HEADERS) $(LIB)/libdai$(LE)
205 $(CC) $(CCO)$@ $< $(LIBS)
206
207 examples/example_imagesegmentation$(EE) : examples/example_imagesegmentation.cpp $(HEADERS) $(LIB)/libdai$(LE)
208 ifdef NEW_CIMG
209 $(CC) -DNEW_CIMG $(CIMGINC) $(CCO)$@ $< $(LIBS) $(CIMGLIBS)
210 else
211 $(CC) $(CIMGINC) $(CCO)$@ $< $(LIBS) $(CIMGLIBS)
212 endif
213
214
215 # UNIT TESTS
216 #############
217
218 tests/unit/%$(EE) : tests/unit/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
219 ifneq ($(OS),WINDOWS)
220 $(CC) -DBOOST_TEST_DYN_LINK $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF)
221 else
222 $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF) /SUBSYSTEM:CONSOLE
223 endif
224
225
226 # TESTS
227 ########
228
229 tests/testdai$(EE) : tests/testdai.cpp $(HEADERS) $(LIB)/libdai$(LE)
230 $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
231 tests/testem/testem$(EE) : tests/testem/testem.cpp $(HEADERS) $(LIB)/libdai$(LE)
232 $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
233 tests/testbbp$(EE) : tests/testbbp.cpp $(HEADERS) $(LIB)/libdai$(LE)
234 ifdef WITH_CBP
235 $(CC) $(CCO)$@ $< $(LIBS)
236 else
237 @echo Skipping $@
238 endif
239
240
241 # MATLAB INTERFACE
242 ###################
243
244 matlab/dai$(ME) : $(SRC)/matlab/dai.cpp $(HEADERS) $(SOURCES) $(SRC)/matlab/matlab.cpp
245 $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SOURCES)
246
247 matlab/dai_readfg$(ME) : $(SRC)/matlab/dai_readfg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
248 $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
249
250 matlab/dai_writefg$(ME) : $(SRC)/matlab/dai_writefg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
251 $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
252
253 matlab/dai_potstrength$(ME) : $(SRC)/matlab/dai_potstrength.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
254 $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
255
256
257 # UTILS
258 ########
259
260 utils/createfg$(EE) : utils/createfg.cpp $(HEADERS) $(LIB)/libdai$(LE)
261 $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
262
263 utils/fg2dot$(EE) : utils/fg2dot.cpp $(HEADERS) $(LIB)/libdai$(LE)
264 $(CC) $(CCO)$@ $< $(LIBS)
265
266 utils/fginfo$(EE) : utils/fginfo.cpp $(HEADERS) $(LIB)/libdai$(LE)
267 $(CC) $(CCO)$@ $< $(LIBS)
268
269 utils/uai2fg$(EE) : utils/uai2fg.cpp $(HEADERS) $(LIB)/libdai$(LE)
270 $(CC) $(CCO)$@ $< $(LIBS)
271
272
273 # LIBRARY
274 ##########
275
276 ifneq ($(OS),WINDOWS)
277 $(LIB)/libdai$(LE) : $(OBJECTS)
278 -mkdir -p lib
279 ar rcus $(LIB)/libdai$(LE) $(OBJECTS)
280 else
281 $(LIB)/libdai$(LE) : $(OBJECTS)
282 -mkdir lib
283 lib /out:$(LIB)/libdai$(LE) $(OBJECTS)
284 endif
285
286
287 # REGRESSION TESTS
288 ###################
289
290 testregression : tests/testdai$(EE)
291 @echo Starting regression test...this can take a minute or so!
292 ifneq ($(OS),WINDOWS)
293 cd tests && ./testregression && cd ..
294 else
295 cd tests && testregression.bat && cd ..
296 endif
297
298 testem : tests/testem/testem$(EE)
299 @echo Starting EM tests
300 ifneq ($(OS),WINDOWS)
301 cd tests/testem && ./runtests && cd ../..
302 else
303 cd tests\testem && runtests && cd ..\..
304 endif
305
306
307 # DOCUMENTATION
308 ################
309
310 doc : $(INC)/*.h $(SRC)/*.cpp examples/*.cpp doxygen.conf
311 doxygen doxygen.conf
312
313 README : doc scripts/makeREADME
314 DAI_VERSION=$(DAI_VERSION) DAI_DATE=$(DAI_DATE) scripts/makeREADME
315
316 TAGS :
317 etags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
318 ctags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
319
320
321 # CLEAN
322 ########
323
324 .PHONY : clean
325 ifneq ($(OS),WINDOWS)
326 clean :
327 -rm $(OBJECTS)
328 -rm matlab/*$(ME)
329 -rm examples/example$(EE) examples/example_bipgraph$(EE) examples/example_varset$(EE) examples/example_permute$(EE) examples/example_sprinkler$(EE) examples/example_sprinkler_gibbs$(EE) examples/example_sprinkler_em$(EE) examples/example_imagesegmentation$(EE)
330 -rm tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE)
331 -rm tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/dag_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
332 -rm factorgraph_test.fg alldai_test.aliases
333 -rm utils/fg2dot$(EE) utils/createfg$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
334 -rm -R doc
335 -rm -R lib
336 else
337 clean :
338 -del *.obj
339 -del *.ilk
340 -del *.pdb
341 -del matlab\*$(ME)
342 -del examples\*$(EE)
343 -del examples\*$(EE).manifest
344 -del examples\*.ilk
345 -del examples\*.pdb
346 -del tests\*$(EE)
347 -del tests\*$(EE).manifest
348 -del tests\*.pdb
349 -del tests\*.ilk
350 -del tests\testem\*$(EE)
351 -del tests\testem\*$(EE).manifest
352 -del tests\testem\*.pdb
353 -del tests\testem\*.ilk
354 -del utils\*$(EE)
355 -del utils\*$(EE).manifest
356 -del utils\*.pdb
357 -del utils\*.ilk
358 -del tests\unit\*_test$(EE)
359 -del tests\unit\*_test$(EE).manifest
360 -del tests\unit\*_test.pdb
361 -del tests\unit\*_test.ilk
362 -del factorgraph_test.fg
363 -del alldai_test.aliases
364 -del $(LIB)\libdai$(LE)
365 -rmdir lib
366 endif