Makefile

   1 # This file is part of libDAI - http://www.libdai.org/
   2 #
   3 # libDAI is licensed under the terms of the GNU General Public License version
   4 # 2, or (at your option) any later version. libDAI is distributed without any
   5 # warranty. See the file COPYING for more details.
   6 #
   7 # Copyright (C) 2006-2010  Joris Mooij  [joris dot mooij at libdai dot org]
   8 # Copyright (C) 2006-2007  Radboud University Nijmegen, The Netherlands
   9
  10
  11 # Load the platform independent build configuration file
  12 include Makefile.ALL
  13
  14 # Load the local configuration from Makefile.conf
  15 include Makefile.conf
  16
  17 # Set version and date
  18 DAI_VERSION="git HEAD"
  19 DAI_DATE="April 1, 2010 - or later"
  20
  21 # Directories of libDAI sources
  22 # Location libDAI headers
  23 INC=include/dai
  24 # Location of libDAI source files
  25 SRC=src
  26 # Destination directory of libDAI library
  27 LIB=lib
  28
  29 # Set final compiler flags
  30 ifdef DEBUG
  31   CCFLAGS:=$(CCFLAGS) $(CCDEBUGFLAGS)
  32 else
  33   CCFLAGS:=$(CCFLAGS) $(CCNODEBUGFLAGS)
  34 endif
  35
  36 # Define build targets
  37 TARGETS:=lib tests utils examples
  38 ifdef WITH_MATLAB
  39   TARGETS:=$(TARGETS) matlabs
  40 endif
  41 TARGETS:=$(TARGETS) unittests testregression testem
  42 ifdef WITH_DOC
  43   TARGETS:=$(TARGETS) doc
  44 endif
  45
  46 # Define conditional build targets
  47 NAMES:=bipgraph graph varset daialg alldai clustergraph factor factorgraph properties regiongraph util weightedgraph exceptions exactinf evidence emalg
  48 ifdef WITH_BP
  49   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_BP
  50   NAMES:=$(NAMES) bp
  51 endif
  52 ifdef WITH_FBP
  53   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_FBP
  54   NAMES:=$(NAMES) fbp
  55 endif
  56 ifdef WITH_TRWBP
  57   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_TRWBP
  58   NAMES:=$(NAMES) trwbp
  59 endif
  60 ifdef WITH_MF
  61   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_MF
  62   NAMES:=$(NAMES) mf
  63 endif
  64 ifdef WITH_HAK
  65   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_HAK
  66   NAMES:=$(NAMES) hak
  67 endif
  68 ifdef WITH_LC
  69   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_LC
  70   NAMES:=$(NAMES) lc
  71 endif
  72 ifdef WITH_TREEEP
  73   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_TREEEP
  74   NAMES:=$(NAMES) treeep
  75 endif
  76 ifdef WITH_JTREE
  77   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_JTREE
  78   NAMES:=$(NAMES) jtree
  79 endif
  80 ifdef WITH_MR
  81   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_MR
  82   NAMES:=$(NAMES) mr
  83 endif
  84 ifdef WITH_GIBBS
  85   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_GIBBS
  86   NAMES:=$(NAMES) gibbs
  87 endif
  88 ifdef WITH_CBP
  89   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_CBP
  90   NAMES:=$(NAMES) bbp cbp bp_dual
  91 endif
  92
  93 # Define standard libDAI header dependencies, source file names and object file names
  94 HEADERS=$(foreach name,bipgraph graph index var factor varset smallset prob daialg properties alldai enum exceptions util,$(INC)/$(name).h)
  95 SOURCES:=$(foreach name,$(NAMES),$(SRC)/$(name).cpp)
  96 OBJECTS:=$(foreach name,$(NAMES),$(name)$(OE))
  97
  98 # Setup final command for C++ compiler
  99 ifneq ($(OS),WINDOWS)
 100   CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS) $(CCLIB)
 101 else
 102   CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS)
 103   LIBS:=$(LIBS) $(CCLIB)
 104 endif
 105
 106 # Setup final command for MEX
 107 ifdef NEW_MATLAB
 108   MEXFLAGS:=$(MEXFLAGS) -largeArrayDims
 109 else
 110   MEXFLAGS:=$(MEXFLAGS) -DSMALLMEM
 111 endif
 112 MEX:=$(MEX) $(MEXINC) $(MEXFLAGS) $(WITHFLAGS) $(MEXLIB)
 113
 114
 115 # META TARGETS
 116 ###############
 117
 118 all : $(TARGETS)
 119
 120 examples : examples/example$(EE) examples/example_bipgraph$(EE) examples/example_varset$(EE) examples/example_permute$(EE) examples/example_sprinkler$(EE) examples/example_sprinkler_gibbs$(EE) examples/example_sprinkler_em$(EE) examples/example_imagesegmentation$(EE)
 121
 122 matlabs : matlab/dai$(ME) matlab/dai_readfg$(ME) matlab/dai_writefg$(ME) matlab/dai_potstrength$(ME)
 123
 124 unittests : tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
 125         echo Running unit tests...
 126         tests/unit/var_test$(EE)
 127         tests/unit/smallset_test$(EE)
 128         tests/unit/varset_test$(EE)
 129         tests/unit/graph_test$(EE)
 130         tests/unit/bipgraph_test$(EE)
 131         tests/unit/weightedgraph_test$(EE)
 132         tests/unit/enum_test$(EE)
 133         tests/unit/util_test$(EE)
 134         tests/unit/exceptions_test$(EE)
 135         tests/unit/properties_test$(EE)
 136         tests/unit/index_test$(EE)
 137         tests/unit/prob_test$(EE)
 138         tests/unit/factor_test$(EE)
 139         tests/unit/factorgraph_test$(EE)
 140         tests/unit/clustergraph_test$(EE)
 141         tests/unit/regiongraph_test$(EE)
 142         tests/unit/daialg_test$(EE)
 143         tests/unit/alldai_test$(EE)
 144
 145 tests : tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE) $(unittests)
 146
 147 utils : utils/createfg$(EE) utils/fg2dot$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
 148
 149 lib: $(LIB)/libdai$(LE)
 150
 151
 152 # OBJECTS
 153 ##########
 154
 155 %$(OE) : $(SRC)/%.cpp $(INC)/%.h $(HEADERS)
 156         $(CC) -c $<
 157
 158 bbp$(OE) : $(SRC)/bbp.cpp $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
 159         $(CC) -c $<
 160
 161 cbp$(OE) : $(SRC)/cbp.cpp $(INC)/cbp.h $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
 162         $(CC) -c $<
 163
 164 hak$(OE) : $(SRC)/hak.cpp $(INC)/hak.h $(HEADERS) $(INC)/regiongraph.h
 165         $(CC) -c $<
 166
 167 jtree$(OE) : $(SRC)/jtree.cpp $(INC)/jtree.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h
 168         $(CC) -c $<
 169
 170 treeep$(OE) : $(SRC)/treeep.cpp $(INC)/treeep.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h $(INC)/jtree.h
 171         $(CC) -c $<
 172
 173 emalg$(OE) : $(SRC)/emalg.cpp $(INC)/emalg.h $(INC)/evidence.h $(HEADERS)
 174         $(CC) -c $<
 175
 176
 177 # EXAMPLES
 178 ###########
 179
 180 examples/%$(EE) : examples/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
 181         $(CC) $(CCO)$@ $< $(LIBS)
 182
 183 examples/example_imagesegmentation$(EE) : examples/example_imagesegmentation.cpp $(HEADERS) $(LIB)/libdai$(LE)
 184         -$(CC) $(CCO)$@ $< $(LIBS) -lpthread -lX11
 185
 186
 187 # UNIT TESTS
 188 #############
 189
 190 tests/unit/%$(EE) : tests/unit/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
 191 ifneq ($(OS),WINDOWS)
 192         $(CC) -DBOOST_TEST_DYN_LINK $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF)
 193 else
 194         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF) /SUBSYSTEM:CONSOLE
 195 endif
 196
 197
 198 # TESTS
 199 ########
 200
 201 tests/testdai$(EE) : tests/testdai.cpp $(HEADERS) $(LIB)/libdai$(LE)
 202         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 203 tests/testem/testem$(EE) : tests/testem/testem.cpp $(HEADERS) $(LIB)/libdai$(LE)
 204         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 205 ifdef WITH_CBP
 206 tests/testbbp$(EE) : tests/testbbp.cpp $(HEADERS) $(LIB)/libdai$(LE)
 207         $(CC) $(CCO)$@ $< $(LIBS)
 208 endif
 209
 210
 211 # MATLAB INTERFACE
 212 ###################
 213
 214 matlab/dai$(ME) : $(SRC)/matlab/dai.cpp $(HEADERS) $(SOURCES) $(SRC)/matlab/matlab.cpp
 215         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SOURCES)
 216
 217 matlab/dai_readfg$(ME) : $(SRC)/matlab/dai_readfg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 218         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 219
 220 matlab/dai_writefg$(ME) : $(SRC)/matlab/dai_writefg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 221         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 222
 223 matlab/dai_potstrength$(ME) : $(SRC)/matlab/dai_potstrength.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
 224         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
 225
 226
 227 # UTILS
 228 ########
 229
 230 utils/createfg$(EE) : utils/createfg.cpp $(HEADERS) $(LIB)/libdai$(LE)
 231         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 232
 233 utils/fg2dot$(EE) : utils/fg2dot.cpp $(HEADERS) $(LIB)/libdai$(LE)
 234         $(CC) $(CCO)$@ $< $(LIBS)
 235
 236 utils/fginfo$(EE) : utils/fginfo.cpp $(HEADERS) $(LIB)/libdai$(LE)
 237         $(CC) $(CCO)$@ $< $(LIBS)
 238
 239 utils/uai2fg$(EE) : utils/uai2fg.cpp $(HEADERS) $(LIB)/libdai$(LE)
 240         $(CC) $(CCO)$@ $< $(LIBS)
 241
 242
 243 # LIBRARY
 244 ##########
 245
 246 ifneq ($(OS),WINDOWS)
 247 $(LIB)/libdai$(LE) : $(OBJECTS)
 248         -mkdir -p lib
 249         ar rcus $(LIB)/libdai$(LE) $(OBJECTS)
 250 else
 251 $(LIB)/libdai$(LE) : $(OBJECTS)
 252         -mkdir lib
 253         lib /out:$(LIB)/libdai$(LE) $(OBJECTS)
 254 endif
 255
 256
 257 # REGRESSION TESTS
 258 ###################
 259
 260 testregression : tests/testdai$(EE)
 261         @echo Starting regression test...this can take a minute or so!
 262 ifneq ($(OS),WINDOWS)
 263         cd tests && ./testregression && cd ..
 264 else
 265         cd tests && testregression.bat && cd ..
 266 endif
 267
 268 testem : tests/testem/testem$(EE)
 269         @echo Starting EM tests
 270 ifneq ($(OS),WINDOWS)
 271         cd tests/testem && ./runtests && cd ../..
 272 else
 273         cd tests\testem && runtests && cd ..\..
 274 endif
 275
 276
 277 # DOCUMENTATION
 278 ################
 279
 280 doc : $(INC)/*.h $(SRC)/*.cpp examples/*.cpp doxygen.conf
 281         doxygen doxygen.conf
 282
 283 README : doc scripts/makeREADME
 284         DAI_VERSION=$(DAI_VERSION) DAI_DATE=$(DAI_DATE) scripts/makeREADME
 285
 286 TAGS :
 287         etags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
 288         ctags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
 289
 290
 291 # CLEAN
 292 ########
 293
 294 .PHONY : clean
 295 ifneq ($(OS),WINDOWS)
 296 clean :
 297         -rm $(OBJECTS)
 298         -rm matlab/*$(ME)
 299         -rm examples/example$(EE) examples/example_bipgraph$(EE) examples/example_varset$(EE) examples/example_permute$(EE) examples/example_sprinkler$(EE) examples/example_sprinkler_gibbs$(EE) examples/example_sprinkler_em$(EE) examples/example_imagesegmentation$(EE)
 300         -rm tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE)
 301         -rm tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
 302         -rm factorgraph_test.fg alldai_test.aliases
 303         -rm utils/fg2dot$(EE) utils/createfg$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
 304         -rm -R doc
 305         -rm -R lib
 306 else
 307 clean :
 308         -del *.obj
 309         -del *.ilk
 310         -del *.pdb
 311         -del matlab\*$(ME)
 312         -del examples\*$(EE)
 313         -del examples\*$(EE).manifest
 314         -del examples\*.ilk
 315         -del examples\*.pdb
 316         -del tests\*$(EE)
 317         -del tests\*$(EE).manifest
 318         -del tests\*.pdb
 319         -del tests\*.ilk
 320         -del tests\testem\*$(EE)
 321         -del tests\testem\*$(EE).manifest
 322         -del tests\testem\*.pdb
 323         -del tests\testem\*.ilk
 324         -del utils\*$(EE)
 325         -del utils\*$(EE).manifest
 326         -del utils\*.pdb
 327         -del utils\*.ilk
 328         -del tests\unit\*_test$(EE)
 329         -del tests\unit\*_test$(EE).manifest
 330         -del tests\unit\*_test.pdb
 331         -del tests\unit\*_test.ilk
 332         -del factorgraph_test.fg
 333         -del alldai_test.aliases
 334         -del $(LIB)\libdai$(LE)
 335         -rmdir lib
 336 endif