Makefile

   1 # This file is part of libDAI - http://www.libdai.org/
   2 #
   3 # Copyright (c) 2006-2011, The libDAI authors. All rights reserved.
   4 #
   5 # Use of this source code is governed by a BSD-style license that can be found in the LICENSE file.
   6
   7
   8 # Load the platform independent build configuration file
   9 include Makefile.ALL
  10
  11 # Load the local configuration from Makefile.conf
  12 include Makefile.conf
  13
  14 # Set version and date
  15 DAI_VERSION="git HEAD"
  16 DAI_DATE="September 17, 2012 - or later"
  17
  18 # Directories of libDAI sources
  19 # Location of libDAI headers
  20 INC=include/dai
  21 # Location of libDAI source files
  22 SRC=src
  23 # Destination directory of libDAI library
  24 LIB=lib
  25
  26 # Set final compiler flags
  27 ifdef DEBUG
  28   CCFLAGS:=$(CCFLAGS) $(CCDEBUGFLAGS)
  29 else
  30   CCFLAGS:=$(CCFLAGS) $(CCNODEBUGFLAGS)
  31 endif
  32
  33 # Define build targets
  34 TARGETS:=lib tests utils examples
  35 ifdef WITH_MATLAB
  36   TARGETS:=$(TARGETS) matlabs
  37 endif
  38 TARGETS:=$(TARGETS) unittests testregression testem
  39 ifdef WITH_DOC
  40   TARGETS:=$(TARGETS) doc
  41 endif
  42
  43 # Define conditional build targets
  44 NAMES:=graph dag bipgraph varset daialg alldai clustergraph factor factorgraph properties regiongraph cobwebgraph util weightedgraph exceptions exactinf evidence emalg io
  45 ifdef WITH_BP
  46   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_BP
  47   NAMES:=$(NAMES) bp
  48 endif
  49 ifdef WITH_FBP
  50   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_FBP
  51   NAMES:=$(NAMES) fbp
  52 endif
  53 ifdef WITH_TRWBP
  54   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_TRWBP
  55   NAMES:=$(NAMES) trwbp
  56 endif
  57 ifdef WITH_MF
  58   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_MF
  59   NAMES:=$(NAMES) mf
  60 endif
  61 ifdef WITH_HAK
  62   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_HAK
  63   NAMES:=$(NAMES) hak
  64 endif
  65 ifdef WITH_LC
  66   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_LC
  67   NAMES:=$(NAMES) lc
  68 endif
  69 ifdef WITH_TREEEP
  70   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_TREEEP
  71   NAMES:=$(NAMES) treeep
  72 endif
  73 ifdef WITH_JTREE
  74   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_JTREE
  75   NAMES:=$(NAMES) jtree
  76 endif
  77 ifdef WITH_MR
  78   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_MR
  79   NAMES:=$(NAMES) mr
  80 endif
  81 ifdef WITH_GIBBS
  82   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_GIBBS
  83   NAMES:=$(NAMES) gibbs
  84 endif
  85 ifdef WITH_CBP
  86   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_CBP
  87   NAMES:=$(NAMES) bbp cbp bp_dual
  88 endif
  89 ifdef WITH_DECMAP
  90   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_DECMAP
  91   NAMES:=$(NAMES) decmap
  92 endif
  93 ifdef WITH_GLC
  94   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_GLC
  95   NAMES:=$(NAMES) glc
  96 endif
  97
  98
  99 # Define standard libDAI header dependencies, source file names and object file names
 100 HEADERS=$(foreach name,graph dag bipgraph index var factor varset smallset prob daialg properties alldai enum exceptions util,$(INC)/$(name).h)
 101 SOURCES:=$(foreach name,$(NAMES),$(SRC)/$(name).cpp)
 102 OBJECTS:=$(foreach name,$(NAMES),$(name)$(OE))
 103
 104 # Setup final command for C++ compiler
 105 ifneq ($(OS),WINDOWS)
 106   CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS) $(CCLIB)
 107 else
 108   CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS)
 109   LIBS:=$(LIBS) $(CCLIB)
 110 endif
 111
 112 # Setup final command for MEX
 113 ifdef NEW_MATLAB
 114   MEXFLAGS:=$(MEXFLAGS) -largeArrayDims
 115 else
 116   MEXFLAGS:=$(MEXFLAGS) -DSMALLMEM
 117 endif
 118 MEX:=$(MEX) $(MEXINC) $(MEXFLAGS) $(WITHFLAGS) $(MEXLIBS) $(MEXLIB)
 119
 120
 121 # META TARGETS
 122 ###############
 123
 124 all : $(TARGETS)
 125         @echo
 126         @echo libDAI built successfully!
 127
 128 EXAMPLES=$(foreach name,example example_bipgraph example_varset example_permute example_sprinkler example_sprinkler_em,examples/$(name)$(EE))
 129 ifdef WITH_GIBBS
 130   EXAMPLES:=$(EXAMPLES) examples/example_sprinkler_gibbs$(EE)
 131 endif
 132 ifdef WITH_CIMG
 133   EXAMPLES:=$(EXAMPLES) examples/example_imagesegmentation$(EE)
 134 endif
 135 examples : $(EXAMPLES)
 136
 137 matlabs : matlab/dai$(ME) matlab/dai_readfg$(ME) matlab/dai_writefg$(ME) matlab/dai_potstrength$(ME) matlab/dai_jtree$(ME)
 138
 139 unittests : tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/dag_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
 140         @echo 'Running unit tests...'
 141         @echo
 142         tests/unit/var_test$(EE)
 143         tests/unit/smallset_test$(EE)
 144         tests/unit/varset_test$(EE)
 145         tests/unit/graph_test$(EE)
 146         tests/unit/dag_test$(EE)
 147         tests/unit/bipgraph_test$(EE)
 148         tests/unit/weightedgraph_test$(EE)
 149         tests/unit/enum_test$(EE)
 150         tests/unit/util_test$(EE)
 151         tests/unit/exceptions_test$(EE)
 152         tests/unit/properties_test$(EE)
 153         tests/unit/index_test$(EE)
 154         tests/unit/prob_test$(EE)
 155         tests/unit/factor_test$(EE)
 156         tests/unit/factorgraph_test$(EE)
 157         tests/unit/clustergraph_test$(EE)
 158         tests/unit/regiongraph_test$(EE)
 159         tests/unit/daialg_test$(EE)
 160         tests/unit/alldai_test$(EE)
 161         @echo
 162         @echo 'All unit tests completed successfully!'
 163         @echo
 164
 165 tests : tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE) $(unittests)
 166
 167 utils : utils/createfg$(EE) utils/fg2dot$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
 168
 169 lib: $(LIB)/libdai$(LE)
 170
 171
 172 # OBJECTS
 173 ##########
 174
 175 %$(OE) : $(SRC)/%.cpp $(INC)/%.h $(HEADERS)
 176         $(CC) -c $<
 177
 178 bbp$(OE) : $(SRC)/bbp.cpp $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
 179         $(CC) -c $<
 180
 181 cbp$(OE) : $(SRC)/cbp.cpp $(INC)/cbp.h $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
 182         $(CC) -c $<
 183
 184 hak$(OE) : $(SRC)/hak.cpp $(INC)/hak.h $(HEADERS) $(INC)/regiongraph.h
 185         $(CC) -c $<
 186
 187 jtree$(OE) : $(SRC)/jtree.cpp $(INC)/jtree.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h
 188         $(CC) -c $<
 189
 190 treeep$(OE) : $(SRC)/treeep.cpp $(INC)/treeep.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h $(INC)/jtree.h
 191         $(CC) -c $<
 192
 193 emalg$(OE) : $(SRC)/emalg.cpp $(INC)/emalg.h $(INC)/evidence.h $(HEADERS)
 194         $(CC) -c $<
 195
 196 decmap$(OE) : $(SRC)/decmap.cpp $(INC)/decmap.h $(HEADERS)
 197         $(CC) -c $<
 198
 199 glc$(OE) : $(SRC)/glc.cpp $(INC)/glc.h $(HEADERS) $(INC)/cobwebgraph.h
 200         $(CC) -c $<
 201
 202
 203 # EXAMPLES
 204 ###########
 205
 206 examples/%$(EE) : examples/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
 207         $(CC) $(CCO)$@ $< $(LIBS)
 208
 209 examples/example_sprinkler_gibbs$(EE) : examples/example_sprinkler_gibbs.cpp $(HEADERS) $(LIB)/libdai$(LE)
 210         $(CC) $(CCO)$@ $< $(LIBS)
 211
 212 examples/example_imagesegmentation$(EE) : examples/example_imagesegmentation.cpp $(HEADERS) $(LIB)/libdai$(LE)
 213 ifdef NEW_CIMG
 214         $(CC) -DNEW_CIMG $(CIMGINC) $(CCO)$@ $< $(LIBS) $(CIMGLIBS)
 215 else
 216         $(CC) $(CIMGINC) $(CCO)$@ $< $(LIBS) $(CIMGLIBS)
 217 endif
 218
 219
 220 # UNIT TESTS
 221 #############
 222
 223 tests/unit/%$(EE) : tests/unit/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
 224 ifneq ($(OS),WINDOWS)
 225         $(CC) -DBOOST_TEST_DYN_LINK $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF)
 226 else
 227         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF) /SUBSYSTEM:CONSOLE
 228 endif
 229
 230
 231 # TESTS
 232 ########
 233
 234 tests/testdai$(EE) : tests/testdai.cpp $(HEADERS) $(LIB)/libdai$(LE)
 235         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 236 tests/testem/testem$(EE) : tests/testem/testem.cpp $(HEADERS) $(LIB)/libdai$(LE)
 237         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 238 tests/testbbp$(EE) : tests/testbbp.cpp $(HEADERS) $(LIB)/libdai$(LE)
 239 ifdef WITH_CBP
 240         $(CC) $(CCO)$@ $< $(LIBS)
 241 else
 242         @echo Skipping $@
 243 endif
 244
 245
 246 # MATLAB INTERFACE
 247 ###################
 248
 249 matlab/dai$(ME) : $(SRC)/matlab/dai.cpp $(HEADERS) $(SOURCES) $(SRC)/matlab/matlab.cpp
 250         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SOURCES)
 251
 252 matlab/dai_readfg$(ME) : $(SRC)/matlab/dai_readfg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 253         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 254
 255 matlab/dai_writefg$(ME) : $(SRC)/matlab/dai_writefg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 256         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 257
 258 matlab/dai_potstrength$(ME) : $(SRC)/matlab/dai_potstrength.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
 259         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
 260
 261 matlab/dai_jtree$(ME) : $(SRC)/matlab/dai_jtree.cpp $(HEADERS) $(SOURCES) $(SRC)/matlab/matlab.cpp
 262         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SOURCES)
 263
 264
 265 # UTILS
 266 ########
 267
 268 utils/createfg$(EE) : utils/createfg.cpp $(HEADERS) $(LIB)/libdai$(LE)
 269         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 270
 271 utils/fg2dot$(EE) : utils/fg2dot.cpp $(HEADERS) $(LIB)/libdai$(LE)
 272         $(CC) $(CCO)$@ $< $(LIBS)
 273
 274 utils/fginfo$(EE) : utils/fginfo.cpp $(HEADERS) $(LIB)/libdai$(LE)
 275         $(CC) $(CCO)$@ $< $(LIBS)
 276
 277 utils/uai2fg$(EE) : utils/uai2fg.cpp $(HEADERS) $(LIB)/libdai$(LE)
 278         $(CC) $(CCO)$@ $< $(LIBS)
 279
 280
 281 # LIBRARY
 282 ##########
 283
 284 ifneq ($(OS),WINDOWS)
 285 $(LIB)/libdai$(LE) : $(OBJECTS)
 286         -mkdir -p lib
 287         ar rcus $(LIB)/libdai$(LE) $(OBJECTS)
 288 else
 289 $(LIB)/libdai$(LE) : $(OBJECTS)
 290         -mkdir lib
 291         lib /out:$(LIB)/libdai$(LE) $(OBJECTS)
 292 endif
 293
 294
 295 # REGRESSION TESTS
 296 ###################
 297
 298 testregression : tests/testdai$(EE)
 299         @echo Starting regression test...this can take a minute or so!
 300 ifneq ($(OS),WINDOWS)
 301         cd tests && ./testregression && cd ..
 302 else
 303         cd tests && testregression.bat && cd ..
 304 endif
 305
 306 testem : tests/testem/testem$(EE)
 307         @echo Starting EM tests
 308 ifneq ($(OS),WINDOWS)
 309         cd tests/testem && ./runtests && cd ../..
 310 else
 311         cd tests\testem && runtests && cd ..\..
 312 endif
 313
 314
 315 # DOCUMENTATION
 316 ################
 317
 318 doc : $(INC)/*.h $(SRC)/*.cpp examples/*.cpp doxygen.conf
 319         doxygen doxygen.conf
 320
 321 README : doc scripts/makeREADME Makefile
 322         DAI_VERSION=$(DAI_VERSION) DAI_DATE=$(DAI_DATE) scripts/makeREADME
 323
 324 TAGS :
 325         etags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
 326         ctags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
 327
 328
 329 # CLEAN
 330 ########
 331
 332 .PHONY : clean
 333 ifneq ($(OS),WINDOWS)
 334 clean :
 335         -rm $(OBJECTS)
 336         -rm matlab/*$(ME)
 337         -rm examples/example$(EE) examples/example_bipgraph$(EE) examples/example_varset$(EE) examples/example_permute$(EE) examples/example_sprinkler$(EE) examples/example_sprinkler_gibbs$(EE) examples/example_sprinkler_em$(EE) examples/example_imagesegmentation$(EE)
 338         -rm tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE)
 339         -rm tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/dag_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
 340         -rm factorgraph_test.fg alldai_test.aliases
 341         -rm utils/fg2dot$(EE) utils/createfg$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
 342         -rm -R doc
 343         -rm -R lib
 344 else
 345 clean :
 346         -del *.obj
 347         -del *.ilk
 348         -del *.pdb
 349         -del matlab\*$(ME)
 350         -del examples\*$(EE)
 351         -del examples\*$(EE).manifest
 352         -del examples\*.ilk
 353         -del examples\*.pdb
 354         -del tests\*$(EE)
 355         -del tests\*$(EE).manifest
 356         -del tests\*.pdb
 357         -del tests\*.ilk
 358         -del tests\testem\*$(EE)
 359         -del tests\testem\*$(EE).manifest
 360         -del tests\testem\*.pdb
 361         -del tests\testem\*.ilk
 362         -del utils\*$(EE)
 363         -del utils\*$(EE).manifest
 364         -del utils\*.pdb
 365         -del utils\*.ilk
 366         -del tests\unit\*_test$(EE)
 367         -del tests\unit\*_test$(EE).manifest
 368         -del tests\unit\*_test.pdb
 369         -del tests\unit\*_test.ilk
 370         -del factorgraph_test.fg
 371         -del alldai_test.aliases
 372         -del $(LIB)\libdai$(LE)
 373         -rmdir lib
 374 endif