Makefile

   1 # This file is part of libDAI - http://www.libdai.org/
   2 #
   3 # libDAI is licensed under the terms of the GNU General Public License version
   4 # 2, or (at your option) any later version. libDAI is distributed without any
   5 # warranty. See the file COPYING for more details.
   6 #
   7 # Copyright (C) 2006-2010  Joris Mooij  [joris dot mooij at libdai dot org]
   8 # Copyright (C) 2006-2007  Radboud University Nijmegen, The Netherlands
   9
  10
  11 # Load the platform independent build configuration file
  12 include Makefile.ALL
  13
  14 # Load the local configuration from Makefile.conf
  15 include Makefile.conf
  16
  17 # Set version and date
  18 DAI_VERSION="git HEAD"
  19 DAI_DATE="May 12, 2010, or later"
  20
  21 # Directories of libDAI sources
  22 # Location of libDAI headers
  23 INC=include/dai
  24 # Location of libDAI source files
  25 SRC=src
  26 # Destination directory of libDAI library
  27 LIB=lib
  28
  29 # Set final compiler flags
  30 ifdef DEBUG
  31   CCFLAGS:=$(CCFLAGS) $(CCDEBUGFLAGS)
  32 else
  33   CCFLAGS:=$(CCFLAGS) $(CCNODEBUGFLAGS)
  34 endif
  35
  36 # Define build targets
  37 TARGETS:=lib tests utils examples
  38 ifdef WITH_MATLAB
  39   TARGETS:=$(TARGETS) matlabs
  40 endif
  41 TARGETS:=$(TARGETS) unittests testregression testem
  42 ifdef WITH_DOC
  43   TARGETS:=$(TARGETS) doc
  44 endif
  45
  46 # Define conditional build targets
  47 NAMES:=graph dag bipgraph varset daialg alldai clustergraph factor factorgraph properties regiongraph util weightedgraph exceptions exactinf evidence emalg
  48 ifdef WITH_BP
  49   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_BP
  50   NAMES:=$(NAMES) bp
  51 endif
  52 ifdef WITH_FBP
  53   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_FBP
  54   NAMES:=$(NAMES) fbp
  55 endif
  56 ifdef WITH_TRWBP
  57   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_TRWBP
  58   NAMES:=$(NAMES) trwbp
  59 endif
  60 ifdef WITH_MF
  61   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_MF
  62   NAMES:=$(NAMES) mf
  63 endif
  64 ifdef WITH_HAK
  65   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_HAK
  66   NAMES:=$(NAMES) hak
  67 endif
  68 ifdef WITH_LC
  69   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_LC
  70   NAMES:=$(NAMES) lc
  71 endif
  72 ifdef WITH_TREEEP
  73   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_TREEEP
  74   NAMES:=$(NAMES) treeep
  75 endif
  76 ifdef WITH_JTREE
  77   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_JTREE
  78   NAMES:=$(NAMES) jtree
  79 endif
  80 ifdef WITH_MR
  81   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_MR
  82   NAMES:=$(NAMES) mr
  83 endif
  84 ifdef WITH_GIBBS
  85   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_GIBBS
  86   NAMES:=$(NAMES) gibbs
  87 endif
  88 ifdef WITH_CBP
  89   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_CBP
  90   NAMES:=$(NAMES) bbp cbp bp_dual
  91 endif
  92 ifdef WITH_DECMAP
  93   WITHFLAGS:=$(WITHFLAGS) -DDAI_WITH_DECMAP
  94   NAMES:=$(NAMES) decmap
  95 endif
  96
  97 # Define standard libDAI header dependencies, source file names and object file names
  98 HEADERS=$(foreach name,graph dag bipgraph index var factor varset smallset prob daialg properties alldai enum exceptions util,$(INC)/$(name).h)
  99 SOURCES:=$(foreach name,$(NAMES),$(SRC)/$(name).cpp)
 100 OBJECTS:=$(foreach name,$(NAMES),$(name)$(OE))
 101
 102 # Setup final command for C++ compiler
 103 ifneq ($(OS),WINDOWS)
 104   CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS) $(CCLIB)
 105 else
 106   CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS)
 107   LIBS:=$(LIBS) $(CCLIB)
 108 endif
 109
 110 # Setup final command for MEX
 111 ifdef NEW_MATLAB
 112   MEXFLAGS:=$(MEXFLAGS) -largeArrayDims
 113 else
 114   MEXFLAGS:=$(MEXFLAGS) -DSMALLMEM
 115 endif
 116 MEX:=$(MEX) $(MEXINC) $(MEXFLAGS) $(WITHFLAGS) $(MEXLIB)
 117
 118
 119 # META TARGETS
 120 ###############
 121
 122 all : $(TARGETS)
 123         @echo libDAI built successfully!
 124
 125 examples : examples/example$(EE) examples/example_bipgraph$(EE) examples/example_varset$(EE) examples/example_permute$(EE) examples/example_sprinkler$(EE) examples/example_sprinkler_gibbs$(EE) examples/example_sprinkler_em$(EE) examples/example_imagesegmentation$(EE)
 126
 127 matlabs : matlab/dai$(ME) matlab/dai_readfg$(ME) matlab/dai_writefg$(ME) matlab/dai_potstrength$(ME)
 128
 129 unittests : tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/dag_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
 130         echo Running unit tests...
 131         tests/unit/var_test$(EE)
 132         tests/unit/smallset_test$(EE)
 133         tests/unit/varset_test$(EE)
 134         tests/unit/graph_test$(EE)
 135         tests/unit/dag_test$(EE)
 136         tests/unit/bipgraph_test$(EE)
 137         tests/unit/weightedgraph_test$(EE)
 138         tests/unit/enum_test$(EE)
 139         tests/unit/util_test$(EE)
 140         tests/unit/exceptions_test$(EE)
 141         tests/unit/properties_test$(EE)
 142         tests/unit/index_test$(EE)
 143         tests/unit/prob_test$(EE)
 144         tests/unit/factor_test$(EE)
 145         tests/unit/factorgraph_test$(EE)
 146         tests/unit/clustergraph_test$(EE)
 147         tests/unit/regiongraph_test$(EE)
 148         tests/unit/daialg_test$(EE)
 149         tests/unit/alldai_test$(EE)
 150
 151 tests : tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE) $(unittests)
 152
 153 utils : utils/createfg$(EE) utils/fg2dot$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
 154
 155 lib: $(LIB)/libdai$(LE)
 156
 157
 158 # OBJECTS
 159 ##########
 160
 161 %$(OE) : $(SRC)/%.cpp $(INC)/%.h $(HEADERS)
 162         $(CC) -c $<
 163
 164 bbp$(OE) : $(SRC)/bbp.cpp $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
 165         $(CC) -c $<
 166
 167 cbp$(OE) : $(SRC)/cbp.cpp $(INC)/cbp.h $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
 168         $(CC) -c $<
 169
 170 hak$(OE) : $(SRC)/hak.cpp $(INC)/hak.h $(HEADERS) $(INC)/regiongraph.h
 171         $(CC) -c $<
 172
 173 jtree$(OE) : $(SRC)/jtree.cpp $(INC)/jtree.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h
 174         $(CC) -c $<
 175
 176 treeep$(OE) : $(SRC)/treeep.cpp $(INC)/treeep.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h $(INC)/jtree.h
 177         $(CC) -c $<
 178
 179 emalg$(OE) : $(SRC)/emalg.cpp $(INC)/emalg.h $(INC)/evidence.h $(HEADERS)
 180         $(CC) -c $<
 181
 182 decmap$(OE) : $(SRC)/decmap.cpp $(INC)/decmap.h $(HEADERS)
 183         $(CC) -c $<
 184
 185
 186 # EXAMPLES
 187 ###########
 188
 189 examples/%$(EE) : examples/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
 190         $(CC) $(CCO)$@ $< $(LIBS)
 191
 192 examples/example_sprinkler_gibbs$(EE) : examples/example_sprinkler_gibbs.cpp $(HEADERS) $(LIB)/libdai$(LE)
 193 ifdef WITH_GIBBS
 194         $(CC) $(CCO)$@ $< $(LIBS)
 195 else
 196         @echo Skipping $@
 197 endif
 198
 199 examples/example_imagesegmentation$(EE) : examples/example_imagesegmentation.cpp $(HEADERS) $(LIB)/libdai$(LE)
 200         -$(CC) $(CIMGINC) $(CCO)$@ $< $(LIBS) $(CIMGLIBS)
 201
 202
 203 # UNIT TESTS
 204 #############
 205
 206 tests/unit/%$(EE) : tests/unit/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
 207 ifneq ($(OS),WINDOWS)
 208         $(CC) -DBOOST_TEST_DYN_LINK $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF)
 209 else
 210         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF) /SUBSYSTEM:CONSOLE
 211 endif
 212
 213
 214 # TESTS
 215 ########
 216
 217 tests/testdai$(EE) : tests/testdai.cpp $(HEADERS) $(LIB)/libdai$(LE)
 218         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 219 tests/testem/testem$(EE) : tests/testem/testem.cpp $(HEADERS) $(LIB)/libdai$(LE)
 220         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 221 tests/testbbp$(EE) : tests/testbbp.cpp $(HEADERS) $(LIB)/libdai$(LE)
 222 ifdef WITH_CBP
 223         $(CC) $(CCO)$@ $< $(LIBS)
 224 else
 225         @echo Skipping $@
 226 endif
 227
 228
 229 # MATLAB INTERFACE
 230 ###################
 231
 232 matlab/dai$(ME) : $(SRC)/matlab/dai.cpp $(HEADERS) $(SOURCES) $(SRC)/matlab/matlab.cpp
 233         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SOURCES)
 234
 235 matlab/dai_readfg$(ME) : $(SRC)/matlab/dai_readfg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 236         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 237
 238 matlab/dai_writefg$(ME) : $(SRC)/matlab/dai_writefg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 239         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
 240
 241 matlab/dai_potstrength$(ME) : $(SRC)/matlab/dai_potstrength.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
 242         $(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
 243
 244
 245 # UTILS
 246 ########
 247
 248 utils/createfg$(EE) : utils/createfg.cpp $(HEADERS) $(LIB)/libdai$(LE)
 249         $(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
 250
 251 utils/fg2dot$(EE) : utils/fg2dot.cpp $(HEADERS) $(LIB)/libdai$(LE)
 252         $(CC) $(CCO)$@ $< $(LIBS)
 253
 254 utils/fginfo$(EE) : utils/fginfo.cpp $(HEADERS) $(LIB)/libdai$(LE)
 255         $(CC) $(CCO)$@ $< $(LIBS)
 256
 257 utils/uai2fg$(EE) : utils/uai2fg.cpp $(HEADERS) $(LIB)/libdai$(LE)
 258         $(CC) $(CCO)$@ $< $(LIBS)
 259
 260
 261 # LIBRARY
 262 ##########
 263
 264 ifneq ($(OS),WINDOWS)
 265 $(LIB)/libdai$(LE) : $(OBJECTS)
 266         -mkdir -p lib
 267         ar rcus $(LIB)/libdai$(LE) $(OBJECTS)
 268 else
 269 $(LIB)/libdai$(LE) : $(OBJECTS)
 270         -mkdir lib
 271         lib /out:$(LIB)/libdai$(LE) $(OBJECTS)
 272 endif
 273
 274
 275 # REGRESSION TESTS
 276 ###################
 277
 278 testregression : tests/testdai$(EE)
 279         @echo Starting regression test...this can take a minute or so!
 280 ifneq ($(OS),WINDOWS)
 281         cd tests && ./testregression && cd ..
 282 else
 283         cd tests && testregression.bat && cd ..
 284 endif
 285
 286 testem : tests/testem/testem$(EE)
 287         @echo Starting EM tests
 288 ifneq ($(OS),WINDOWS)
 289         cd tests/testem && ./runtests && cd ../..
 290 else
 291         cd tests\testem && runtests && cd ..\..
 292 endif
 293
 294
 295 # DOCUMENTATION
 296 ################
 297
 298 doc : $(INC)/*.h $(SRC)/*.cpp examples/*.cpp doxygen.conf
 299         doxygen doxygen.conf
 300
 301 README : doc scripts/makeREADME
 302         DAI_VERSION=$(DAI_VERSION) DAI_DATE=$(DAI_DATE) scripts/makeREADME
 303
 304 TAGS :
 305         etags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
 306         ctags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
 307
 308
 309 # CLEAN
 310 ########
 311
 312 .PHONY : clean
 313 ifneq ($(OS),WINDOWS)
 314 clean :
 315         -rm $(OBJECTS)
 316         -rm matlab/*$(ME)
 317         -rm examples/example$(EE) examples/example_bipgraph$(EE) examples/example_varset$(EE) examples/example_permute$(EE) examples/example_sprinkler$(EE) examples/example_sprinkler_gibbs$(EE) examples/example_sprinkler_em$(EE) examples/example_imagesegmentation$(EE)
 318         -rm tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE)
 319         -rm tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/dag_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
 320         -rm factorgraph_test.fg alldai_test.aliases
 321         -rm utils/fg2dot$(EE) utils/createfg$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
 322         -rm -R doc
 323         -rm -R lib
 324 else
 325 clean :
 326         -del *.obj
 327         -del *.ilk
 328         -del *.pdb
 329         -del matlab\*$(ME)
 330         -del examples\*$(EE)
 331         -del examples\*$(EE).manifest
 332         -del examples\*.ilk
 333         -del examples\*.pdb
 334         -del tests\*$(EE)
 335         -del tests\*$(EE).manifest
 336         -del tests\*.pdb
 337         -del tests\*.ilk
 338         -del tests\testem\*$(EE)
 339         -del tests\testem\*$(EE).manifest
 340         -del tests\testem\*.pdb
 341         -del tests\testem\*.ilk
 342         -del utils\*$(EE)
 343         -del utils\*$(EE).manifest
 344         -del utils\*.pdb
 345         -del utils\*.ilk
 346         -del tests\unit\*_test$(EE)
 347         -del tests\unit\*_test$(EE).manifest
 348         -del tests\unit\*_test.pdb
 349         -del tests\unit\*_test.ilk
 350         -del factorgraph_test.fg
 351         -del alldai_test.aliases
 352         -del $(LIB)\libdai$(LE)
 353         -rmdir lib
 354 endif