Makefile

   1 #   Copyright (C) 2006-2008  Joris Mooij  [j dot mooij at science dot ru dot nl]
   2 #   Radboud University Nijmegen, The Netherlands
   3 #
   4 #   This file is part of libDAI.
   5 #
   6 #   libDAI is free software; you can redistribute it and/or modify
   7 #   it under the terms of the GNU General Public License as published by
   8 #   the Free Software Foundation; either version 2 of the License, or
   9 #   (at your option) any later version.
  10 #
  11 #   libDAI is distributed in the hope that it will be useful,
  12 #   but WITHOUT ANY WARRANTY; without even the implied warranty of
  13 #   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  14 #   GNU General Public License for more details.
  15 #
  16 #   You should have received a copy of the GNU General Public License
  17 #   along with libDAI; if not, write to the Free Software
  18 #   Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
  19
  20
  21 # Enable/disable various approximate inference methods
  22 WITH_BP=true
  23 WITH_MF=true
  24 WITH_HAK=true
  25 WITH_LC=true
  26 WITH_TREEEP=true
  27 WITH_JTREE=true
  28 WITH_MR=true
  29 # Build with debug info?
  30 DEBUG=true
  31 # Build matlab interface?
  32 WITH_MATLAB=
  33 # New/old matlab version?
  34 NEW_MATLAB=true
  35 # Windows or linux (default)?
  36 WINDOWS=
  37
  38 # Directories
  39 INC=include/dai
  40 SRC=src
  41 LIB=lib
  42
  43 # Extensions (library, object, executable extensions)
  44 LE=.a
  45 OE=.o
  46 EE=
  47
  48 # Libraries
  49 LIBS=-ldai
  50
  51 # We use the BOOST Program Options library
  52 BOOSTLIBS=-lboost_program_options
  53
  54 # Compile using GNU C++ Compiler
  55 CC=g++
  56
  57 # Flags for the C++ compiler
  58 CCFLAGS=-Wno-deprecated -Wall -W -Wextra -fpic -I./include -Llib -O3 #-pg #-static #-DVERBOSE
  59 ifdef DEBUG
  60 CCFLAGS:=$(CCFLAGS) -g -DDAI_DEBUG
  61 endif
  62
  63 ifdef WINDOWS
  64 CCFLAGS=$(CCFLAGS) -DWINDOWS
  65 endif
  66
  67 OBJECTS:=exactinf$(OE)
  68 ifdef WITH_BP
  69 CCFLAGS:=$(CCFLAGS) -DWITH_BP
  70 OBJECTS:=$(OBJECTS) bp$(OE)
  71 endif
  72 ifdef WITH_MF
  73 CCFLAGS:=$(CCFLAGS) -DWITH_MF
  74 OBJECTS:=$(OBJECTS) mf$(OE)
  75 endif
  76 ifdef WITH_HAK
  77 CCFLAGS:=$(CCFLAGS) -DWITH_HAK
  78 OBJECTS:=$(OBJECTS) hak$(OE)
  79 endif
  80 ifdef WITH_LC
  81 CCFLAGS:=$(CCFLAGS) -DWITH_LC
  82 OBJECTS:=$(OBJECTS) lc$(OE)
  83 endif
  84 ifdef WITH_TREEEP
  85 CCFLAGS:=$(CCFLAGS) -DWITH_TREEEP
  86 OBJECTS:=$(OBJECTS) treeep$(OE)
  87 endif
  88 ifdef WITH_JTREE
  89 CCFLAGS:=$(CCFLAGS) -DWITH_JTREE
  90 OBJECTS:=$(OBJECTS) jtree$(OE)
  91 endif
  92 ifdef WITH_MR
  93 CCFLAGS:=$(CCFLAGS) -DWITH_MR
  94 OBJECTS:=$(OBJECTS) mr$(OE)
  95 endif
  96
  97 ifdef WITH_MATLAB
  98 # Replace the following by the directory where Matlab has been installed
  99 MATLABDIR=/opt/matlab/bin
 100 # Replace the following with the extension of compiled MEX files on this platform, e.g. .mexglx for x86
 101 ME=.mexglx
 102 MEX=$(MATLABDIR)/mex
 103 MEXFLAGS=-I.
 104 ifdef DEBUG
 105 MEXFLAGS:=$(MEXFLAGS) -g -DDAI_DEBUG
 106 endif
 107 ifdef NEW_MATLAB
 108 MEXFLAGS:=$(MEXFLAGS) -largeArrayDims
 109 else
 110 MEXFLAGS:=$(MEXFLAGS) -DSMALLMEM
 111 endif
 112 endif
 113
 114 HEADERS=$(INC)/bipgraph.h $(INC)/diffs.h $(INC)/index.h $(INC)/var.h $(INC)/factor.h $(INC)/varset.h $(INC)/prob.h $(INC)/daialg.h $(INC)/properties.h $(INC)/alldai.h $(INC)/enum.h $(INC)/x2x.h $(INC)/exceptions.h
 115
 116 TARGETS=tests utils $(LIB)/libdai$(LE) example$(EE) testregression doc
 117 ifdef WITH_MATLAB
 118 TARGETS:=$(TARGETS) matlabs
 119 endif
 120 all : $(TARGETS)
 121         echo -e "\a"
 122
 123 matlabs : matlab/dai.$(ME) matlab/dai_readfg.$(ME) matlab/dai_writefg.$(ME) matlab/dai_potstrength.$(ME)
 124
 125 $(LIB)/libdai$(LE) : bipgraph$(OE) daialg$(OE) alldai$(OE) clustergraph$(OE) factorgraph$(OE) properties$(OE) regiongraph$(OE) util$(OE) weightedgraph$(OE) x2x$(OE) exceptions$(OE) $(OBJECTS)
 126         ar rcus $(LIB)/libdai$(LE) bipgraph$(OE) daialg$(OE) alldai$(OE) clustergraph$(OE) factorgraph$(OE) properties$(OE) regiongraph$(OE) util$(OE) weightedgraph$(OE) x2x$(OE) exceptions$(OE) $(OBJECTS)
 127
 128 tests : tests/test$(EE)
 129
 130 utils : utils/createfg$(EE) utils/fg2dot$(EE) utils/fginfo$(EE)
 131
 132 testregression : tests/test
 133         echo Testing...this can take a while...
 134         cd tests; time ./testregression; cd ..
 135
 136 doc : $(INC)/*.h $(SRC)/*.cpp doxygen.conf
 137         doxygen doxygen.conf
 138
 139 clean :
 140         rm *$(OE) example$(EE) matlab/*.$(ME) matlab/*$(OE) tests/test$(EE) utils/fg2dot$(EE) utils/createfg$(EE) utils/fginfo$(EE) $(LIB)/libdai$(LE); echo
 141         rm -R doc; echo
 142
 143 bipgraph$(OE) : $(SRC)/bipgraph.cpp $(HEADERS)
 144         $(CC) $(CCFLAGS) -c $(SRC)/bipgraph.cpp
 145
 146 daialg$(OE) : $(SRC)/daialg.cpp $(HEADERS)
 147         $(CC) $(CCFLAGS) -c $(SRC)/daialg.cpp
 148
 149 exactinf$(OE) : $(SRC)/exactinf.cpp $(INC)/exactinf.h $(HEADERS)
 150         $(CC) $(CCFLAGS) -c $(SRC)/exactinf.cpp
 151
 152 bp$(OE) : $(SRC)/bp.cpp $(INC)/bp.h $(HEADERS)
 153         $(CC) $(CCFLAGS) -c $(SRC)/bp.cpp
 154
 155 lc$(OE) : $(SRC)/lc.cpp $(INC)/lc.h $(HEADERS)
 156         $(CC) $(CCFLAGS) -c $(SRC)/lc.cpp
 157
 158 mf$(OE) : $(SRC)/mf.cpp $(INC)/mf.h $(HEADERS)
 159         $(CC) $(CCFLAGS) -c $(SRC)/mf.cpp
 160
 161 factorgraph$(OE) : $(SRC)/factorgraph.cpp $(INC)/factorgraph.h $(HEADERS)
 162         $(CC) $(CCFLAGS) -c $(SRC)/factorgraph.cpp
 163
 164 util$(OE) : $(SRC)/util.cpp $(INC)/util.h $(HEADERS)
 165         $(CC) $(CCFLAGS) -c $(SRC)/util.cpp
 166
 167 regiongraph$(OE) : $(SRC)/regiongraph.cpp $(INC)/regiongraph.h $(HEADERS)
 168         $(CC) $(CCFLAGS) -c $(SRC)/regiongraph.cpp
 169
 170 hak$(OE) : $(SRC)/hak.cpp $(INC)/hak.h $(HEADERS) $(INC)/regiongraph.h
 171         $(CC) $(CCFLAGS) -c $(SRC)/hak.cpp
 172
 173 clustergraph$(OE) : $(SRC)/clustergraph.cpp $(INC)/clustergraph.h $(HEADERS)
 174         $(CC) $(CCFLAGS) -c $(SRC)/clustergraph.cpp
 175
 176 jtree$(OE) : $(SRC)/jtree.cpp $(INC)/jtree.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h
 177         $(CC) $(CCFLAGS) -c $(SRC)/jtree.cpp
 178
 179 treeep$(OE) : $(SRC)/treeep.cpp $(INC)/treeep.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h $(INC)/jtree.h
 180         $(CC) $(CCFLAGS) -c $(SRC)/treeep.cpp
 181
 182 weightedgraph$(OE) : $(SRC)/weightedgraph.cpp $(INC)/weightedgraph.h $(HEADERS)
 183         $(CC) $(CCFLAGS) -c $(SRC)/weightedgraph.cpp
 184
 185 mr$(OE) : $(SRC)/mr.cpp $(INC)/mr.h $(HEADERS)
 186         $(CC) $(CCFLAGS) -c $(SRC)/mr.cpp
 187
 188 properties$(OE) : $(SRC)/properties.cpp $(HEADERS)
 189         $(CC) $(CCFLAGS) -c $(SRC)/properties.cpp
 190
 191 exceptions$(OE) : $(SRC)/exceptions.cpp $(HEADERS)
 192         $(CC) $(CCFLAGS) -c $(SRC)/exceptions.cpp
 193
 194 alldai$(OE) : $(SRC)/alldai.cpp $(HEADERS)
 195         $(CC) $(CCFLAGS) -c $(SRC)/alldai.cpp
 196
 197 x2x$(OE) : $(SRC)/x2x.cpp $(HEADERS)
 198         $(CC) $(CCFLAGS) -c $(SRC)/x2x.cpp
 199
 200
 201 # EXAMPLE
 202 ##########
 203
 204 example$(EE) : example.cpp $(HEADERS) $(LIB)/libdai$(LE)
 205         $(CC) $(CCFLAGS) -o example$(EE) example.cpp $(LIBS)
 206
 207 # TESTS
 208 ########
 209
 210 tests/test$(EE) : tests/test.cpp $(HEADERS) $(LIB)/libdai$(LE)
 211         $(CC) $(CCFLAGS) -o tests/test$(EE) tests/test.cpp $(LIBS) $(BOOSTLIBS)
 212
 213
 214 # MATLAB INTERFACE
 215 ###################
 216
 217 matlab/dai.$(ME) : matlab/dai.cpp $(HEADERS) matlab/matlab$(OE) $(LIB)/libdai$(LE)
 218         $(MEX) $(MEXFLAGS) -o matlab/dai matlab/dai.cpp matlab/matlab$(OE) $(LIB)/libdai$(LE)
 219
 220 matlab/dai_readfg.$(ME) : matlab/dai_readfg.cpp $(HEADERS) factorgraph$(OE) matlab/matlab$(OE) exceptions$(OE)
 221         $(MEX) $(MEXFLAGS) -o matlab/dai_readfg matlab/dai_readfg.cpp factorgraph$(OE) matlab/matlab$(OE) exceptions$(OE)
 222
 223 matlab/dai_writefg.$(ME) : matlab/dai_writefg.cpp $(HEADERS) factorgraph$(OE) matlab/matlab$(OE) exceptions$(OE)
 224         $(MEX) $(MEXFLAGS) -o matlab/dai_writefg matlab/dai_writefg.cpp factorgraph$(OE) matlab/matlab$(OE) exceptions$(OE)
 225
 226 matlab/dai_potstrength.$(ME) : matlab/dai_potstrength.cpp $(HEADERS) matlab/matlab$(OE) exceptions$(OE)
 227         $(MEX) $(MEXFLAGS) -o matlab/dai_potstrength matlab/dai_potstrength.cpp matlab/matlab$(OE) exceptions$(OE)
 228
 229 matlab/matlab$(OE) : matlab/matlab.cpp matlab/matlab.h $(HEADERS)
 230         $(MEX) $(MEXFLAGS) -outdir matlab -c matlab/matlab.cpp
 231
 232
 233 # UTILS
 234 ########
 235
 236 utils/createfg$(EE) : utils/createfg.cpp $(HEADERS) $(LIB)/libdai$(LE)
 237         $(CC) $(CCFLAGS) -o utils/createfg utils/createfg.cpp $(LIBS) $(BOOSTLIBS)
 238
 239 utils/fg2dot$(EE) : utils/fg2dot.cpp $(HEADERS) $(LIB)/libdai$(LE)
 240         $(CC) $(CCFLAGS) -o utils/fg2dot utils/fg2dot.cpp $(LIBS)
 241
 242 utils/fginfo$(EE) : utils/fginfo.cpp $(HEADERS) $(LIB)/libdai$(LE)
 243         $(CC) $(CCFLAGS) -o utils/fginfo utils/fginfo.cpp $(LIBS)