Makefile

   1 #   Copyright (C) 2006-2008  Joris Mooij  [j dot mooij at science dot ru dot nl]
   2 #   Radboud University Nijmegen, The Netherlands
   3 #
   4 #   This file is part of libDAI.
   5 #
   6 #   libDAI is free software; you can redistribute it and/or modify
   7 #   it under the terms of the GNU General Public License as published by
   8 #   the Free Software Foundation; either version 2 of the License, or
   9 #   (at your option) any later version.
  10 #
  11 #   libDAI is distributed in the hope that it will be useful,
  12 #   but WITHOUT ANY WARRANTY; without even the implied warranty of
  13 #   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  14 #   GNU General Public License for more details.
  15 #
  16 #   You should have received a copy of the GNU General Public License
  17 #   along with libDAI; if not, write to the Free Software
  18 #   Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
  19
  20
  21 # Directories
  22 INC = include/dai
  23 SRC = src
  24 LIB = lib
  25
  26 # We use the BOOST Program Options library
  27 BOOSTFLAGS = -lboost_program_options
  28
  29 # Compile using GNU C++ Compiler
  30 CC = g++
  31
  32 # Flags for the C++ compiler
  33 CCFLAGS = -Wall -W -Wextra -fpic -g -DDEBUG -I./include -Llib -O3 #-static #-pg #-DVERBOSE
  34
  35 # To enable the Matlab interface, define WITH_MATLAB = yes
  36 WITH_MATLAB =
  37 ifdef WITH_MATLAB
  38 # Replace the following by the directory where Matlab has been installed
  39 MATLABDIR = /opt/matlab/bin
  40 MEX = $(MATLABDIR)/mex
  41 MEXFLAGS = -g -I. -DDEBUG -largeArrayDims #-g means debugging
  42 endif
  43
  44 # Replace the following with the extension of compiled MEX files on this platform, e.g. .mexglx for x86
  45 MEXEXT = .mexglx
  46
  47 HEADERS = $(INC)/bipgraph.h $(INC)/diffs.h $(INC)/index.h $(INC)/var.h $(INC)/factor.h $(INC)/varset.h $(INC)/prob.h $(INC)/daialg.h $(INC)/properties.h $(INC)/alldai.h $(INC)/enum.h $(INC)/x2x.h
  48
  49 # target matlabs is disabled by default since it only compiles with a very recent MatLab version
  50 TARGETS = tests utils $(LIB)/libdai.a example testregression
  51 ifdef WITH_MATLAB
  52 TARGETS := $(TARGETS) matlabs
  53 endif
  54 all : $(TARGETS)
  55         echo -e "\a"
  56
  57 matlabs : matlab/dai.$(MEXEXT) matlab/dai_readfg.$(MEXEXT) matlab/dai_writefg.$(MEXEXT) matlab/dai_removeshortloops.$(MEXEXT) matlab/dai_potstrength.$(MEXEXT)
  58
  59 $(LIB)/libdai.a : daialg.o alldai.o bp.o clustergraph.o factorgraph.o hak.o jtree.o lc.o mf.o mr.o properties.o regiongraph.o util.o treeep.o weightedgraph.o x2x.o
  60         ar rcs $(LIB)/libdai.a daialg.o alldai.o bp.o clustergraph.o factorgraph.o hak.o jtree.o lc.o mf.o mr.o properties.o regiongraph.o util.o treeep.o weightedgraph.o x2x.o
  61
  62 tests : tests/test
  63
  64 utils : utils/createfg utils/fg2dot utils/remove_short_loops utils/fginfo
  65
  66 testregression : tests/test
  67         echo Testing...this can take a while...
  68         cd tests; ./testregression; cd ..
  69
  70 doc : $(INC)/*.h $(SRC)/*.cpp doxygen.conf
  71         doxygen doxygen.conf
  72
  73 clean :
  74         rm *.o *.$(MEXEXT) example matlab/*.$(MEXEXT) matlab/*.o tests/test utils/fg2dot utils/createfg utils/remove_short_loops utils/fginfo $(LIB)/libdai.a; echo
  75         rm -R doc; echo
  76
  77
  78 daialg.o : $(SRC)/daialg.cpp $(HEADERS)
  79         $(CC) $(CCFLAGS) -c $(SRC)/daialg.cpp
  80
  81 bp.o : $(SRC)/bp.cpp $(INC)/bp.h $(HEADERS)
  82         $(CC) $(CCFLAGS) -c $(SRC)/bp.cpp
  83
  84 lc.o : $(SRC)/lc.cpp $(INC)/lc.h $(HEADERS)
  85         $(CC) $(CCFLAGS) -c $(SRC)/lc.cpp
  86
  87 mf.o : $(SRC)/mf.cpp $(INC)/mf.h $(HEADERS)
  88         $(CC) $(CCFLAGS) -c $(SRC)/mf.cpp
  89
  90 factorgraph.o : $(SRC)/factorgraph.cpp $(INC)/factorgraph.h $(HEADERS)
  91         $(CC) $(CCFLAGS) -c $(SRC)/factorgraph.cpp
  92
  93 util.o : $(SRC)/util.cpp $(INC)/util.h $(HEADERS)
  94         $(CC) $(CCFLAGS) -c $(SRC)/util.cpp
  95
  96 regiongraph.o : $(SRC)/regiongraph.cpp $(INC)/regiongraph.h $(HEADERS)
  97         $(CC) $(CCFLAGS) -c $(SRC)/regiongraph.cpp
  98
  99 hak.o : $(SRC)/hak.cpp $(INC)/hak.h $(HEADERS) $(INC)/regiongraph.h
 100         $(CC) $(CCFLAGS) -c $(SRC)/hak.cpp
 101
 102 clustergraph.o : $(SRC)/clustergraph.cpp $(INC)/clustergraph.h $(HEADERS)
 103         $(CC) $(CCFLAGS) -c $(SRC)/clustergraph.cpp
 104
 105 jtree.o : $(SRC)/jtree.cpp $(INC)/jtree.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h
 106         $(CC) $(CCFLAGS) -c $(SRC)/jtree.cpp
 107
 108 treeep.o : $(SRC)/treeep.cpp $(INC)/treeep.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h $(INC)/jtree.h
 109         $(CC) $(CCFLAGS) -c $(SRC)/treeep.cpp
 110
 111 weightedgraph.o : $(SRC)/weightedgraph.cpp $(INC)/weightedgraph.h $(HEADERS)
 112         $(CC) $(CCFLAGS) -c $(SRC)/weightedgraph.cpp
 113
 114 mr.o : $(SRC)/mr.cpp $(INC)/mr.h $(HEADERS)
 115         $(CC) $(CCFLAGS) -c $(SRC)/mr.cpp
 116
 117 properties.o : $(SRC)/properties.cpp $(HEADERS)
 118         $(CC) $(CCFLAGS) -c $(SRC)/properties.cpp
 119
 120 alldai.o : $(SRC)/alldai.cpp $(HEADERS)
 121         $(CC) $(CCFLAGS) -c $(SRC)/alldai.cpp
 122
 123 x2x.o : $(SRC)/x2x.cpp $(HEADERS)
 124         $(CC) $(CCFLAGS) -c $(SRC)/x2x.cpp
 125
 126 # EXAMPLE
 127 ##########
 128
 129 example : $(SRC)/example.cpp $(HEADERS) $(LIB)/libdai.a
 130         $(CC) $(CCFLAGS) -o example $(SRC)/example.cpp -ldai
 131
 132 # TESTS
 133 ########
 134
 135 tests/test : tests/test.cpp $(HEADERS) lib/libdai.a
 136         $(CC) $(CCFLAGS) -o tests/test tests/test.cpp -ldai $(BOOSTFLAGS)
 137
 138
 139 # MATLAB INTERFACE
 140 ###################
 141
 142 matlab/dai.$(MEXEXT) : matlab/dai.cpp $(HEADERS) matlab/matlab.o daialg.o alldai.o bp.o clustergraph.o factorgraph.o hak.o jtree.o lc.o mf.o mr.o properties.o regiongraph.o util.o treeep.o weightedgraph.o x2x.o
 143         $(MEX) $(MEXFLAGS) -o matlab/dai matlab/dai.cpp matlab/matlab.o daialg.o alldai.o bp.o clustergraph.o factorgraph.o hak.o jtree.o lc.o mf.o mr.o properties.o regiongraph.o util.o treeep.o weightedgraph.o x2x.o
 144
 145 matlab/dai_readfg.$(MEXEXT) : matlab/dai_readfg.cpp $(HEADERS) factorgraph.o matlab/matlab.o
 146         $(MEX) $(MEXFLAGS) -o matlab/dai_readfg matlab/dai_readfg.cpp factorgraph.o matlab/matlab.o
 147
 148 matlab/dai_writefg.$(MEXEXT) : matlab/dai_writefg.cpp $(HEADERS) factorgraph.o matlab/matlab.o
 149         $(MEX) $(MEXFLAGS) -o matlab/dai_writefg matlab/dai_writefg.cpp factorgraph.o matlab/matlab.o
 150
 151 matlab/dai_removeshortloops.$(MEXEXT) : matlab/dai_removeshortloops.cpp $(HEADERS) factorgraph.o matlab/matlab.o
 152         $(MEX) $(MEXFLAGS) -o matlab/dai_removeshortloops matlab/dai_removeshortloops.cpp factorgraph.o matlab/matlab.o
 153
 154 matlab/dai_potstrength.$(MEXEXT) : matlab/dai_potstrength.cpp $(HEADERS) matlab/matlab.o
 155         $(MEX) $(MEXFLAGS) -o matlab/dai_potstrength matlab/dai_potstrength.cpp matlab/matlab.o
 156
 157 matlab/matlab.o : matlab/matlab.cpp matlab/matlab.h $(HEADERS)
 158         $(MEX) $(MEXFLAGS) -outdir matlab -c matlab/matlab.cpp
 159
 160
 161 # UTILS
 162 ########
 163
 164 utils/createfg : utils/createfg.cpp $(HEADERS) factorgraph.o weightedgraph.o util.o
 165         $(CC) $(CCFLAGS) -o utils/createfg utils/createfg.cpp factorgraph.o weightedgraph.o util.o $(BOOSTFLAGS)
 166
 167 utils/fg2dot : utils/fg2dot.cpp $(HEADERS) factorgraph.o
 168         $(CC) $(CCFLAGS) -o utils/fg2dot utils/fg2dot.cpp factorgraph.o
 169
 170 utils/remove_short_loops : utils/remove_short_loops.cpp $(HEADERS) factorgraph.o
 171         $(CC) $(CCFLAGS) -o utils/remove_short_loops utils/remove_short_loops.cpp factorgraph.o
 172
 173 utils/fginfo : utils/fginfo.cpp $(HEADERS) factorgraph.o
 174         $(CC) $(CCFLAGS) -o utils/fginfo utils/fginfo.cpp factorgraph.o