Makefile

   1 #   Copyright (C) 2006-2008  Joris Mooij  [j dot mooij at science dot ru dot nl]
   2 #   Radboud University Nijmegen, The Netherlands
   3 #
   4 #   This file is part of libDAI.
   5 #
   6 #   libDAI is free software; you can redistribute it and/or modify
   7 #   it under the terms of the GNU General Public License as published by
   8 #   the Free Software Foundation; either version 2 of the License, or
   9 #   (at your option) any later version.
  10 #
  11 #   libDAI is distributed in the hope that it will be useful,
  12 #   but WITHOUT ANY WARRANTY; without even the implied warranty of
  13 #   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  14 #   GNU General Public License for more details.
  15 #
  16 #   You should have received a copy of the GNU General Public License
  17 #   along with libDAI; if not, write to the Free Software
  18 #   Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
  19
  20
  21 # We use the BOOST Program Options library
  22 BOOSTFLAGS = -lboost_program_options
  23
  24 # Compile using GNU C++ Compiler
  25 CC = g++
  26
  27 # Flags for the C++ compiler
  28 CCFLAGS = -Wall -fpic -g -DDEBUG -I. -I$(HOME)/include -O3 #-static #-pg #-DVERBOSE
  29
  30 # To enable the Matlab interface, define WITH_MATLAB = yes
  31 WITH_MATLAB =
  32 ifdef WITH_MATLAB
  33 # Replace the following by the directory where Matlab has been installed
  34 MATLABDIR = /opt/matlab/bin
  35 MEX = $(MATLABDIR)/mex
  36 MEXFLAGS = -g -I. -DDEBUG -largeArrayDims #-g means debugging
  37 endif
  38
  39 # Replace the following with the extension of compiled MEX files on this platform, e.g. .mexglx for x86
  40 MEXEXT = .mexglx
  41
  42 HEADERS = bipgraph.h diffs.h index.h var.h factor.h varset.h prob.h daialg.h properties.h alldai.h enum.h x2x.h
  43
  44 # target matlabs is disabled by default since it only compiles with a very recent MatLab version
  45 TARGETS = tests utils libdai.a example testregression
  46 ifdef WITH_MATLAB
  47 TARGETS := $(TARGETS) matlabs
  48 endif
  49 all : $(TARGETS)
  50         echo -e "\a"
  51
  52 matlabs : matlab/dai.$(MEXEXT) matlab/dai_readfg.$(MEXEXT) matlab/dai_writefg.$(MEXEXT) matlab/dai_removeshortloops.$(MEXEXT) matlab/dai_potstrength.$(MEXEXT)
  53
  54 libdai.a : daialg.o alldai.o bp.o clustergraph.o factorgraph.o hak.o jtree.o lc.o mf.o mr.o properties.o regiongraph.o util.o treeep.o weightedgraph.o x2x.o
  55         ar rcs libdai.a daialg.o alldai.o bp.o clustergraph.o factorgraph.o hak.o jtree.o lc.o mf.o mr.o properties.o regiongraph.o util.o treeep.o weightedgraph.o x2x.o
  56
  57 tests : tests/test
  58
  59 utils : utils/createfg utils/fg2dot utils/remove_short_loops utils/fginfo
  60
  61 testregression : tests/test
  62         echo Testing...this can take a while...
  63         cd tests; ./testregression; cd ..
  64
  65 doc : *.h *.cpp doxygen.conf
  66         doxygen doxygen.conf
  67
  68 clean :
  69         rm *.o *.$(MEXEXT) example matlab/*.$(MEXEXT) matlab/*.o tests/test utils/fg2dot utils/createfg utils/remove_short_loops utils/fginfo libdai.a; echo
  70         rm -R doc; echo
  71
  72
  73 daialg.o : daialg.cpp $(HEADERS)
  74         $(CC) $(CCFLAGS) -c daialg.cpp
  75
  76 bp.o : bp.cpp bp.h $(HEADERS)
  77         $(CC) $(CCFLAGS) -c bp.cpp
  78
  79 lc.o : lc.cpp lc.h $(HEADERS)
  80         $(CC) $(CCFLAGS) -c lc.cpp
  81
  82 mf.o : mf.cpp mf.h $(HEADERS)
  83         $(CC) $(CCFLAGS) -c mf.cpp
  84
  85 factorgraph.o : factorgraph.cpp factorgraph.h $(HEADERS)
  86         $(CC) $(CCFLAGS) -c factorgraph.cpp
  87
  88 util.o : util.cpp util.h $(HEADERS)
  89         $(CC) $(CCFLAGS) -c util.cpp
  90
  91 regiongraph.o : regiongraph.cpp regiongraph.h $(HEADERS)
  92         $(CC) $(CCFLAGS) -c regiongraph.cpp
  93
  94 hak.o : hak.cpp hak.h $(HEADERS) regiongraph.h
  95         $(CC) $(CCFLAGS) -c hak.cpp
  96
  97 clustergraph.o : clustergraph.cpp clustergraph.h $(HEADERS)
  98         $(CC) $(CCFLAGS) -c clustergraph.cpp
  99
 100 jtree.o : jtree.cpp jtree.h $(HEADERS) weightedgraph.h clustergraph.h regiongraph.h
 101         $(CC) $(CCFLAGS) -c jtree.cpp
 102
 103 treeep.o : treeep.cpp treeep.h $(HEADERS) weightedgraph.h clustergraph.h regiongraph.h jtree.h
 104         $(CC) $(CCFLAGS) -c treeep.cpp
 105
 106 weightedgraph.o : weightedgraph.cpp weightedgraph.h $(HEADERS)
 107         $(CC) $(CCFLAGS) -c weightedgraph.cpp
 108
 109 mr.o : mr.cpp mr.h $(HEADERS)
 110         $(CC) $(CCFLAGS) -c mr.cpp
 111
 112 properties.o : properties.cpp $(HEADERS)
 113         $(CC) $(CCFLAGS) -c properties.cpp
 114
 115 alldai.o : alldai.cpp $(HEADERS)
 116         $(CC) $(CCFLAGS) -c alldai.cpp
 117
 118 x2x.o : x2x.cpp $(HEADERS)
 119         $(CC) $(CCFLAGS) -c x2x.cpp
 120
 121 # EXAMPLE
 122 ##########
 123
 124 example : example.cpp $(HEADERS) libdai.a
 125         $(CC) $(CCFLAGS) -o example example.cpp -L. libdai.a
 126
 127 # TESTS
 128 ########
 129
 130 tests/test : tests/test.cpp $(HEADERS) libdai.a
 131         $(CC) $(CCFLAGS) -o tests/test tests/test.cpp -L. -ldai $(BOOSTFLAGS)
 132
 133
 134 # MATLAB INTERFACE
 135 ###################
 136
 137 matlab/dai.$(MEXEXT) : matlab/dai.cpp $(HEADERS) matlab/matlab.o daialg.o alldai.o bp.o clustergraph.o factorgraph.o hak.o jtree.o lc.o mf.o mr.o properties.o regiongraph.o util.o treeep.o weightedgraph.o x2x.o
 138         $(MEX) $(MEXFLAGS) -o matlab/dai matlab/dai.cpp matlab/matlab.o daialg.o alldai.o bp.o clustergraph.o factorgraph.o hak.o jtree.o lc.o mf.o mr.o properties.o regiongraph.o util.o treeep.o weightedgraph.o x2x.o
 139
 140 matlab/dai_readfg.$(MEXEXT) : matlab/dai_readfg.cpp $(HEADERS) factorgraph.o matlab/matlab.o
 141         $(MEX) $(MEXFLAGS) -o matlab/dai_readfg matlab/dai_readfg.cpp factorgraph.o matlab/matlab.o
 142
 143 matlab/dai_writefg.$(MEXEXT) : matlab/dai_writefg.cpp $(HEADERS) factorgraph.o matlab/matlab.o
 144         $(MEX) $(MEXFLAGS) -o matlab/dai_writefg matlab/dai_writefg.cpp factorgraph.o matlab/matlab.o
 145
 146 matlab/dai_removeshortloops.$(MEXEXT) : matlab/dai_removeshortloops.cpp $(HEADERS) factorgraph.o matlab/matlab.o
 147         $(MEX) $(MEXFLAGS) -o matlab/dai_removeshortloops matlab/dai_removeshortloops.cpp factorgraph.o matlab/matlab.o
 148
 149 matlab/dai_potstrength.$(MEXEXT) : matlab/dai_potstrength.cpp $(HEADERS) matlab/matlab.o
 150         $(MEX) $(MEXFLAGS) -o matlab/dai_potstrength matlab/dai_potstrength.cpp matlab/matlab.o
 151
 152 matlab/matlab.o : matlab/matlab.cpp matlab/matlab.h $(HEADERS)
 153         $(MEX) $(MEXFLAGS) -outdir matlab -c matlab/matlab.cpp
 154
 155
 156 # UTILS
 157 ########
 158
 159 utils/createfg : utils/createfg.cpp $(HEADERS) factorgraph.o weightedgraph.o util.o
 160         $(CC) $(CCFLAGS) -o utils/createfg utils/createfg.cpp factorgraph.o weightedgraph.o util.o $(BOOSTFLAGS)
 161
 162 utils/fg2dot : utils/fg2dot.cpp $(HEADERS) factorgraph.o
 163         $(CC) $(CCFLAGS) -o utils/fg2dot utils/fg2dot.cpp factorgraph.o
 164
 165 utils/remove_short_loops : utils/remove_short_loops.cpp $(HEADERS) factorgraph.o
 166         $(CC) $(CCFLAGS) -o utils/remove_short_loops utils/remove_short_loops.cpp factorgraph.o
 167
 168 utils/fginfo : utils/fginfo.cpp $(HEADERS) factorgraph.o
 169         $(CC) $(CCFLAGS) -o utils/fginfo utils/fginfo.cpp factorgraph.o