Fixed testem failure caused by rounding error

[libdai.git] / include / dai / alldai.h

diff --git a/include/dai/alldai.h b/include/dai/alldai.h
index 4d5e178..c0010ca 100644 (file)
--- a/include/dai/alldai.h
+++ b/include/dai/alldai.h
@@ -1,6 +1,7 @@
-/*  Copyright (C) 2006-2008  Joris Mooij  [j dot mooij at science dot ru dot nl]
-    Radboud University Nijmegen, The Netherlands
-    
+/*  Copyright (C) 2006-2008  Joris Mooij  [joris dot mooij at tuebingen dot mpg dot de]
+    Radboud University Nijmegen, The Netherlands /
+    Max Planck Institute for Biological Cybernetics, Germany
+

     This file is part of libDAI.
 
     libDAI is free software; you can redistribute it and/or modify
     This file is part of libDAI.
 
     libDAI is free software; you can redistribute it and/or modify


@@ -19,6 +20,11 @@
 */
 
 
 */
 
 

+/// \file
+/// \brief Main libDAI header file
+/// \todo Improve documentation
+
+

 #ifndef __defined_libdai_alldai_h
 #define __defined_libdai_alldai_h
 
 #ifndef __defined_libdai_alldai_h
 #define __defined_libdai_alldai_h
 


@@ -26,61 +32,74 @@
 #include <string>
 #include <dai/daialg.h>
 #include <dai/properties.h>
 #include <string>
 #include <dai/daialg.h>
 #include <dai/properties.h>

-#ifdef WITH_BP
+#include <dai/exactinf.h>
+#include <dai/evidence.h>
+#include <dai/emalg.h>
+#ifdef DAI_WITH_BP

     #include <dai/bp.h>
 #endif
     #include <dai/bp.h>
 #endif

-#ifdef WITH_MF
+#ifdef DAI_WITH_MF

     #include <dai/mf.h>
 #endif
     #include <dai/mf.h>
 #endif

-#ifdef WITH_HAK
+#ifdef DAI_WITH_HAK

     #include <dai/hak.h>
 #endif
     #include <dai/hak.h>
 #endif

-#ifdef WITH_LC
+#ifdef DAI_WITH_LC

     #include <dai/lc.h>
 #endif
     #include <dai/lc.h>
 #endif

-#ifdef WITH_TREEEP
+#ifdef DAI_WITH_TREEEP

     #include <dai/treeep.h>
 #endif
     #include <dai/treeep.h>
 #endif

-#ifdef WITH_JTREE
+#ifdef DAI_WITH_JTREE

     #include <dai/jtree.h>
 #endif
     #include <dai/jtree.h>
 #endif

-#ifdef WITH_MR
+#ifdef DAI_WITH_MR

     #include <dai/mr.h>
 #endif
     #include <dai/mr.h>
 #endif

+#ifdef DAI_WITH_GIBBS
+    #include <dai/gibbs.h>
+#endif

 
 
 
 

+/// Namespace for libDAI

 namespace dai {
 
 
 namespace dai {
 
 

-/// newInfAlg constructs a new approximate inference algorithm named name for the
-/// FactorGraph fg with optionts opts and returns a pointer to the new object.
-/// The caller needs to delete it (maybe some sort of smart_ptr might be useful here).
+/// Constructs a new approximate inference algorithm.
+/** \param name The name of the approximate inference algorithm (should be one of the names in DAINames).
+ *  \param fg The FactorGraph that the algorithm should be applied to.
+ *  \param opts A PropertySet specifying the options for the algorithm.
+ *  \return Returns a pointer to the new InfAlg object; it is the responsibility of the caller to delete it later.
+ */

 InfAlg *newInfAlg( const std::string &name, const FactorGraph &fg, const PropertySet &opts );
 
 
 InfAlg *newInfAlg( const std::string &name, const FactorGraph &fg, const PropertySet &opts );
 
 

-/// DAINames contains the names of all approximate inference algorithms
-
+/// Contains the names of all approximate inference algorithms compiled into libDAI.

 static const char* DAINames[] = {
 static const char* DAINames[] = {

-#ifdef WITH_BP
+    ExactInf::Name,
+#ifdef DAI_WITH_BP

     BP::Name, 
 #endif
     BP::Name, 
 #endif

-#ifdef WITH_MF
+#ifdef DAI_WITH_MF

     MF::Name,
 #endif
     MF::Name,
 #endif

-#ifdef WITH_HAK
+#ifdef DAI_WITH_HAK

     HAK::Name,
 #endif
     HAK::Name,
 #endif

-#ifdef WITH_LC
+#ifdef DAI_WITH_LC

     LC::Name,
 #endif
     LC::Name,
 #endif

-#ifdef WITH_TREEEP
+#ifdef DAI_WITH_TREEEP

     TreeEP::Name,
 #endif
     TreeEP::Name,
 #endif

-#ifdef WITH_JTREE
+#ifdef DAI_WITH_JTREE

     JTree::Name,
 #endif
     JTree::Name,
 #endif

-#ifdef WITH_MR
+#ifdef DAI_WITH_MR

     MR::Name,
     MR::Name,

+#endif
+#ifdef DAI_WITH_GIBBS
+    Gibbs::Name,

 #endif
     ""
 };
 #endif
     ""
 };