Removed conversion script FastInf->libDAI because it is buggy (uses wrong permutation...

diff --git a/scripts/convert-fastInf-DAI.pl b/scripts/convert-fastInf-DAI.pl
deleted file mode 100644 (file)
index 5284cb8..0000000
--- a/scripts/convert-fastInf-DAI.pl
+++ /dev/null
@@ -1,132 +0,0 @@
-#! /usr/local/bin/perl
-#
-# This file is part of libDAI - http://www.libdai.org/
-#
-# Copyright (c) 2006-2011, The libDAI authors. All rights reserved.
-#
-# Use of this source code is governed by a BSD-style license that can be found in the LICENSE file.
-
-
-use strict;
-use warnings;
-
-my $HOME = $ENV{HOME} ;
-
-if ($#ARGV == 0) {
-  push (@ARGV,"$ARGV[0].fg") ;
-}
-
-my $expectedArgc = 2 ;
-if ($#ARGV != $expectedArgc-1) {
-  die ("Usage: $0 <inModelFile> <outModelFile>\n") ;
-}
-
-my ($inModelFile,$outModelFile) = @ARGV ;
-
-# First we read the model:
-my (@variables,@cliques,@measures,%cliq2meas,$truePartition) ;
-&readModel ($inModelFile,\@variables,\@cliques,\@measures,\%cliq2meas,\$truePartition) ;
-
-
-open (OUT, ">$outModelFile") or die ("[ERROR] Cannot open output file $outModelFile\n") ;
-
-print OUT "# Converted $inModelFile from fastInf format into DAI format\n" ;
-
-print OUT scalar(@cliques), "\n\n" ;
-
-for (my $i=0 ; $i<scalar(@cliques) ; $i++) {
-  my $cliqLine = $cliques[$i] ;
-  my @splitCliq = split (/\t/, $cliqLine) ;
-  #print "Num vars = " , $splitCliq[1] , "       vars: " , $splitCliq[2] , "\n" ;
-  print OUT $splitCliq[1], "\n" ;
-  print OUT $splitCliq[2], "\n" ;
-
-  my $meas = $cliq2meas{$i} ;
-  my $measLine = $measures[$meas] ;
-  my @splitMeas = split (/\t/, $measLine) ;
-  print OUT $splitMeas[2], "\n" ;
-
-  my @params = split (/\s+/, $splitMeas[3]) ;
-  print OUT scalar(@params) , "\n" ;
-  for (my $j=0 ; $j<scalar(@params) ; $j++) {
-    print OUT $j, " ", $params[$j], "\n" ;
-  }
-  print OUT "\n" ;
-}
-
-close OUT ;
-
-
-
-#################
-## Subroutines ##
-#################
-sub readModel {
-  my ($modelFile,$variables,$cliques,$measures,$cliq2meas,$truePartition) = @_ ;
-
-  open (MOD_IN , "<$modelFile") or die ("[ERROR] Cannot read model from $modelFile\n") ;
-
-  while (defined (my $line=<MOD_IN>)) {
-
-    if ($line =~ m/^\@Variables/) {
-      &readLines (*MOD_IN , $variables) ;
-    }
-    elsif ($line =~ m/^\@Cliques/) {
-      &readLines (*MOD_IN , $cliques) ;
-    }
-    elsif ($line =~ m/^\@Measures/) {
-      &readLines (*MOD_IN , $measures) ;
-    }
-    elsif ($line =~ m/^\@CliqueToMeasure/) {
-      &readCliq2Meas (*MOD_IN , $cliq2meas) ;
-    }
-    elsif ($line =~ m/^# Exact Partitition function:/) {
-      my $partLine ;
-      if (not defined ($partLine = <MOD_IN>)) { die ("[ERROR] Cannot read exact partition function."); }
-      if ($partLine =~ m/^# (\S+)/) {
-        $$truePartition = $1 ;
-      }
-    }
-    # else do nothing
-
-  } # while read line from model file
-
-  close MOD_IN ;
-}
-
-sub readLines {
-  my ($IN,$variables) = @_ ;
-
-  my $endReached = 0 ;
-  while (defined (my $line = <$IN>)) {
-    if ($line =~ m/^\@End/) {
-      $endReached = 1 ;
-      last ;
-    }
-    else {
-      push (@$variables,$line) ;
-    }
-  }
-
-  if (not $endReached) { die ("[ERROR] Could not find \@End statement.\n") ; }
-}
-
-sub readCliq2Meas {
-  my ($IN,$cliq2meas) = @_ ;
-
-  my $endReached = 0 ;
-  while (defined (my $line = <$IN>)) {
-    if ($line =~ m/^\@End/) {
-      $endReached = 1 ;
-      last ;
-    }
-    else {
-      my @splitLine = split(/\t/,$line) ;
-      my $cliq = $splitLine[0] ;
-      my $meas = $splitLine[1] ;
-      $cliq2meas->{$cliq} = $meas ;
-    }
-  }
-
-  if (not $endReached) { die ("[ERROR] Could not find \@End statement.\n") ; }
-}