+ added alignment reconstruction function
[qpalma.git] / scripts / Utils.py
index 74d83a4..1c3c4f7 100644 (file)
@@ -131,7 +131,8 @@ def pprint_alignment(_newSpliceAlign,_newEstAlign, dna_array, est_array):
          dna_array[idx] = translation[int(dna_array[idx])]
          est_array[idx] = translation[int(est_array[idx])]
    except:
-      pdb.set_trace()
+      #pdb.set_trace()
+      pass
 
    line1 = "".join(dna_array)
    line2 = comparison