+ minor changes in the paths
[qpalma.git] / scripts / grid_heuristic.py
index 77b93c1..1fdd697 100644 (file)
@@ -30,17 +30,18 @@ def g_heuristic(run_fname,data_fname,param_fname,result_fname):
 def create_and_submit():
    jp = os.path.join
 
-   num_splits = 25
+   num_splits = 50
 
    run_dir  = '/fml/ag-raetsch/home/fabio/tmp/newest_run/alignment/run_enable_quality_scores_+_enable_splice_signals_+_enable_intron_length_+'
    #data_dir = '/fml/ag-raetsch/home/fabio/tmp/lyrata_analysis/'
 
-   data_dir = '/fml/ag-raetsch/home/fabio/tmp/vmatch_evaluation/main'
+   data_dir = '/fml/ag-raetsch/share/projects/qpalma/thaliana_4_lanes/lane_4/main/'
 
    run_fname      = jp(run_dir,'run_obj.pickle')
 
-   #original_map_fname = '/fml/ag-raetsch/home/fabio/tmp/vmatch_evaluation/main/map.vm'
-   #split_file(original_map_fname,data_dir,num_splits)
+   original_map_fname = jp(data_dir,'map.vm')
+
+   split_file(original_map_fname,data_dir,num_splits)
 
    param_fname    = jp(run_dir,'param_526.pickle')