+ added alignment reconstruction function
[qpalma.git] / scripts / qpalma_main.py
index cf97fb4..d0a17ad 100644 (file)
@@ -742,8 +742,8 @@ class QPalma:
        
       alignment = get_alignment(_newSpliceAlign,_newEstAlign, dna_array, est_array) #(qStart, qEnd, tStart, tEnd, num_exons, qExonSizes, qStarts, qEnds, tExonSizes, tStarts, tEnds)
 
-      dna_array = array.array('c',dna_array)
-      est_array = array.array('c',est_array)
+      dna_array = array.array('B',dna_array)
+      est_array = array.array('B',est_array)
 
       #line1,line2,line3 = pprint_alignment(_newSpliceAlign,_newEstAlign, dna_array, est_array)
       #self.plog(line1+'\n')