+ added license text
[qpalma.git] / tests / test_qpalma_prediction.py
index 8e5e37a..f1211d3 100644 (file)
@@ -111,9 +111,9 @@ class TestQPalmaPrediction(unittest.TestCase):
       accessWrapper = DataAccessWrapper(g_dir,acc_dir,don_dir,g_fmt,s_fmt)
       seqInfo = SeqSpliceInfo(accessWrapper,range(1,num_chromo))
 
-      qp = QPalma(True)
+      qp = QPalma(run,seqInfo,True)
       #qp.init_prediction(run,set_name)
-      allPredictions = qp.predict(run,self.prediction_set,param,seqInfo )
+      allPredictions = qp.predict(self.prediction_set,param)
 
       for current_prediction in allPredictions:
          align_str = print_prediction(current_prediction)