+ added c code from the palma project
authorfabio <fabio@e1793c9e-67f9-0310-80fc-b846ff1f7b36>
Fri, 30 Nov 2007 15:53:57 +0000 (15:53 +0000)
committerfabio <fabio@e1793c9e-67f9-0310-80fc-b846ff1f7b36>
Fri, 30 Nov 2007 15:53:57 +0000 (15:53 +0000)
commit2e7d55a1ae0e0d12a40f30ed7ee4ec725475e55c
tree309040f570b04e726b4897e35b9a697916dfd6f1
parentc8768db666bd239f2c822d28d0e8c9238ed7bbc7
+ added c code from the palma project
+ added own version of the swig interface

TODO

- think about wrapper for structs / cells
  user either SWIG constrcuts or native python object

git-svn-id: http://svn.tuebingen.mpg.de/ag-raetsch/projects/QPalma@6902 e1793c9e-67f9-0310-80fc-b846ff1f7b36
19 files changed:
QPalmaDP/Makefile [new file with mode: 0644]
QPalmaDP/Mathmatics.cpp [new file with mode: 0644]
QPalmaDP/Mathmatics.h [new file with mode: 0644]
QPalmaDP/QPalmaDP.i [new file with mode: 0644]
QPalmaDP/common.h [new file with mode: 0644]
QPalmaDP/config.h [new file with mode: 0644]
QPalmaDP/fill_matrix.cpp [new file with mode: 0644]
QPalmaDP/fill_matrix.h [new file with mode: 0644]
QPalmaDP/io.cpp [new file with mode: 0644]
QPalmaDP/io.h [new file with mode: 0644]
QPalmaDP/penalty_info.cpp [new file with mode: 0644]
QPalmaDP/penalty_info.h [new file with mode: 0644]
QPalmaDP/print_align.cpp [new file with mode: 0644]
QPalmaDP/qpalma_dp.cpp [new file with mode: 0644]
QPalmaDP/qpalma_dp.h [new file with mode: 0644]
QPalmaDP/result_align.cpp [new file with mode: 0644]
python/.qpalma.py.swp
python/computeSpliceWeights.py
python/qpalma.py