+ some minor fixes
authorfabio <fabio@e1793c9e-67f9-0310-80fc-b846ff1f7b36>
Wed, 16 Jan 2008 14:12:57 +0000 (14:12 +0000)
committerfabio <fabio@e1793c9e-67f9-0310-80fc-b846ff1f7b36>
Wed, 16 Jan 2008 14:12:57 +0000 (14:12 +0000)
commit40ba6c193ec16ff366d606191e849e5b35fdff02
treeb4f0f335560837811debfdc4fae98ae04c168bfa
parent1fb4d7c285caaaa22b21754f3b9d93fe3b34d4aa
+ some minor fixes
+ correct init of quality params
+ additional asserions in c-code
+ undefined chars are now '-1' gaps are '0'

git-svn-id: http://svn.tuebingen.mpg.de/ag-raetsch/projects/QPalma@7392 e1793c9e-67f9-0310-80fc-b846ff1f7b36
QPalmaDP/Makefile
QPalmaDP/debug_tools.h
QPalmaDP/fill_matrix.cpp
QPalmaDP/qpalma_dp.cpp
QPalmaDP/qpalma_dp.h
QPalmaDP/result_align.cpp
python/Configuration.py
python/computeSpliceAlignWithQuality.py
python/qpalma.py