+ extended docu
authorFabio <fabio@congo.fml.local>
Fri, 10 Oct 2008 13:44:00 +0000 (15:44 +0200)
committerFabio <fabio@congo.fml.local>
Fri, 10 Oct 2008 13:44:00 +0000 (15:44 +0200)
commit41e07a799b6f1cbdf058b2b44b4c8b8f4cdfdb4a
treede5ee58bb3d47d245cbd105eed88d3e81be60370
parent98acb7950a71d03b1e67eb1189f425434cfeefd5
+ extended docu
+ removed legacy code concerning run object
+ unified tests
+ added creation of artifical small dataset for faster debugging
16 files changed:
README
doc/qpalma-manual.tex [new file with mode: 0644]
doc/qpalma.tex [deleted file]
qpalma/SIQP.py
qpalma/SIQP_CVXOPT.py
qpalma/SettingsParser.py
qpalma/computeSpliceAlignWithQuality.py
qpalma/gridtools.py
qpalma/qpalma_main.py
qpalma/set_param_palma.py
scripts/qpalma_pipeline.py
test.conf
tests/test_qpalma.py [new file with mode: 0644]
tests/test_qpalma_prediction.py [deleted file]
tests/test_sequence_utils.py [deleted file]
tests/test_utils.py [new file with mode: 0644]