+ fix starting point for rewrite of data accession for PipelineHeuristic
authorfabio <fabio@e1793c9e-67f9-0310-80fc-b846ff1f7b36>
Mon, 2 Jun 2008 09:52:55 +0000 (09:52 +0000)
committerfabio <fabio@e1793c9e-67f9-0310-80fc-b846ff1f7b36>
Mon, 2 Jun 2008 09:52:55 +0000 (09:52 +0000)
git-svn-id: http://svn.tuebingen.mpg.de/ag-raetsch/projects/QPalma@9328 e1793c9e-67f9-0310-80fc-b846ff1f7b36

scripts/PipelineHeuristic.py

index 4b51450..40fdadb 100644 (file)
@@ -30,23 +30,7 @@ from qpalma.parsers import *
 
 from Lookup import *
 
-
-def unbracket_est(est):
-   new_est = ''
-   e = 0
-
-   while True:
-      if e >= len(est):
-         break
-
-      if est[e] == '[':
-         new_est += est[e+2]
-         e += 4
-      else:
-         new_est += est[e]
-         e += 1
-
-   return "".join(new_est).lower()
+from qpalma.sequence_utils import *
 
 
 class PipelineHeuristic: