+ using new parsers now
[qpalma.git] / scripts / compile_dataset.py
2008-04-18 fabio+ using new parsers now
2008-04-18 fabiominor changes of paths
2008-04-18 raetschoptimized heuristic
2008-04-18 fabio+ added if statement to create numpy mat for unspliced...
2008-04-18 fabio+ a slighlty better way to create a big dataset
2008-04-18 fabiogit-svn-id: svn.tuebingen.mpg.de/ag-raetsch/projects...
2008-04-16 fabio+ minor modifications to allow for parallel prediction...
2008-04-16 fabio+ added field to prediction dict
2008-04-14 fabio+ finished first running version of the spliced/unsplic...
2008-04-14 fabio+ added information on cut positions of spliced reads
2008-04-07 fabiominor changes in the dataset compilation and the evalua...
2008-03-20 fabio+ minor changes in qpalma_main to take into accout...
2008-03-14 fabio+ training works,
2008-03-12 fabio+ fixed nasty index bugs in the when creating the label...
2008-03-11 fabio+ now using the new interval query interface
2008-03-10 fabio+ fixed bug in the index calculation of donor/acceptor...
2008-03-07 fabio+ changed training method to work with new dataset...
2008-03-06 fabio+ refactored compile dataset -> removed remaining redun...
2008-03-05 fabio+ refactored code further
2008-02-28 fabio+ extended scripts
2008-02-27 fabio+ minor changes
2008-02-26 fabio+ first running version of Evaluation script
2008-02-25 fabio+ dataset size is smaller now (just storing indices).
2008-02-21 fabio+ added use of all remapped possibilities of a given...
2008-02-21 fabio+ fixed bug in the check for aligned dna fragments...
2008-02-21 fabio+ refactored code of dataset generation method
2008-02-11 fabio+ added scripts for model selection on the cluster
2008-02-10 fabio+ changed filter behavior (tendency towards smaller...
2008-02-10 fabio+ fixed a bug in the filtering (forgot to disable remov...
2008-02-09 fabio+ modified dataset generation in order to recalculate...
2008-02-08 fabio+ fixed bug in the computeSpliceAlign... function
2008-02-08 fabio+ minor changes to filterReads
2008-02-06 fabio+ resolved an issue with the memory mapping in filterReads
2008-02-05 fabio+ extended dataset compilation function
2008-02-05 fabio+ minor bugfixes in the compile_dataset script
2008-02-04 fabio+ minor changes
2008-02-04 fabio+ modified filtering of reads
2008-02-02 fabio+ added script to generate datasets