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+ changed check for intial setting of old_w. (matrix != None does not work in cvxopt)
2009-01-26 Fabio+ changed check for intial setting of old_w. (matrix...
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2008-10-23 Fabio+ update makefiles to fetch automatically valid Python...
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2008-10-22 Fabio+ changed parameter handling a bit (input files command...
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2008-10-22 Fabio+ fixed automatic Python path settings in Makefiles
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2008-10-21 Fabio+ set proper logging in optimizer code
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2008-10-20 Fabio+ restructured test cases
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2008-10-15 Fabio+ fixed issue with negative strand in lookup table
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2008-10-15 Fabio+ extended manual to describe output file format
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2008-10-15 Fabio+ fixed alignment index calculation for negative strand
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2008-10-14 Fabio+ fixed minor bugs
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2008-10-14 Fabio+ extended test cases
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2008-10-13 Fabio+ extended documentation
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2008-10-13 Fabio+ fixed some issues with the splice site scores and...
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2008-10-10 Fabio+ extended docu
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2008-10-08 Fabio+ got rid of some legacy code
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2008-10-07 Fabio+ cleaned up directories
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2008-10-07 Fabio+ renamed dyn_prog directory
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2008-10-02 Fabio+ removed load_genomic dependency
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2008-10-02 Fabio+ added palma_utils file
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2008-10-02 Fabio+ added sample configuration file
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2008-10-01 Fabio+ fixed minor inconsistencies in the code
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2008-09-30 Fabio+ combined two scripts that were responsible for generating...
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2008-09-29 Fabio+ extended pipeline code
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2008-09-22 Fabio+ added some documentary text
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2008-09-16 Fabio+ added some text and references to the documentation
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2008-09-14 Fabio+ added module to convert pickled predictions to several...
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2008-09-13 Fabiofixed minor inconsistencies in the code (naming of...
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2008-09-13 Fabio+ moved file to module directory
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2008-09-13 Fabio+ added framework code for training modus
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2008-09-13 Fabio+ added paths for the dataset generation
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2008-09-11 Fabio+ added dataset generation function for training set
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2008-09-10 Fabio+ changed dataset compilation to support new framework
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2008-09-10 Fabio+ got rid of minor bugs
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2008-09-10 Fabio+ changed module hierarchy a bit
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2008-09-10 Fabio+ added settings parser module
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2008-09-10 Fabio+ added settings parser module
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2008-09-10 Fabio+ added configuration file parsing and checking functions
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2008-09-05 Fabio+ added small parts to docu
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2008-09-02 Fabio+ added license text
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2008-09-01 Fabio+ got rid of some unneccessary code
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2008-09-01 Fabio+ changed python and c code in order to perform easier...
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2008-09-01 Fabio+ removed some obsolete dependencies
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2008-09-01 Fabio+ added some docu
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2008-09-01 Fabio+ added some flags to Makefile args
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QPalma the short reads alignment project